RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 F5H6K3 240 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 KIAA0391O15091 583 aaKnown RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 ADCY6O43306 1168 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PSMG1O95456 288 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 KLRC3Q07444 240 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 ACAD10Q6JQN1 1059 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 CACTIN-AS1Q8N1I8 211 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 AGAP11Q8TF27 550 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 FAM120BQ96EK7 910 aaKnown RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PPP1R10Q96QC0 940 aaKnown RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 FYNP06241 537 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 XRCC4Q13426 336 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 ZNF284Q2VY69 593 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 SLC26A11Q86WA9 606 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 ACTRT1Q8TDG2 376 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 TCF7L2Q9NQB0 619 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PLAGL2Q9UPG8 496 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 DGCR6Q14129 220 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 LINC00523Q86TU6 105 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 CYP4Z1Q86W10 505 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 FAM228AQ86W67 206 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 ARHGEF19Q8IW93 802 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 OSCP1Q8WVF1 389 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 TBATAQ96M53 351 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 PLEKHG4BQ96PX9 1271 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 TMEM8AQ9HCN3 771 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 SASH3O75995 380 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 CRKP46108 304 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 RALGDSQ12967 914 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 DDX53Q86TM3 631 aaKnown RBP15.29■□□□□ 0.04
SCN3B-201ENST00000299333 SAPCD2Q86UD0 394 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 STK32CQ86UX6 486 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 GORASP1Q9BQQ3 440 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 RIBC2Q9H4K1 309 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 GTF3C4Q9UKN8 822 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 SLCO1B7G3V0H7 640 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 FGFR3P22607 806 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 SLC1A6P48664 564 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 PURAQ00577 322 aaKnown RBP15.29■□□□□ 0.04
SCN3B-201ENST00000299333 GRAPQ13588 217 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 NRF1Q16656 503 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 TUBA3EQ6PEY2 450 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 IKBIPQ70UQ0 350 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 EID3Q8N140 333 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 NLGN1Q8N2Q7 840 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 GRAPLQ8TC17 118 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-201ENST00000299333 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
SCN3B-201ENST00000299333 USP6P35125 1406 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 ZNF335Q9H4Z2 1342 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-201ENST00000299333 TIMM44O43615 452 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 IGKV5-2P06315 115 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 ARHGEF7Q14155 803 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 KYAT1Q16773 422 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 HIST2H2ACQ16777 129 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-201ENST00000299333 CCDC153Q494R4 210 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 HIST2H2AA3Q6FI13 130 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 PPP1R14AQ96A00 147 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 EHD4Q9H223 541 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 TPRKBQ9Y3C4 175 aa15.29■□□□□ 0.04
SCN3B-201ENST00000299333 ERVV-1B6SEH8 477 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 TSPAN4O14817 238 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 LDLRP01130 860 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 CHN2P52757 468 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 C2CD6Q53TS8 623 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 NECAB2Q7Z6G3 386 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 STRA8Q7Z7C7 330 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 ZNF677Q86XU0 584 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 IZUMO1Q8IYV9 350 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 DHRSXQ8N5I4 330 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 DDX50Q9BQ39 737 aaKnown RBP15.28■□□□□ 0.04
SCN3B-201ENST00000299333 CATSPERBQ9H7T0 1116 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 RBMX2Q9Y388 322 aaKnown RBP15.28■□□□□ 0.04
SCN3B-201ENST00000299333 SDR42E2A6NKP2 422 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 RIPK2O43353 540 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 TUBA3CQ13748 450 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 TMEM132DQ14C87 1099 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 FNIP1Q8TF40 1166 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 NSMCE2Q96MF7 247 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 RNF145Q96MT1 663 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 UNKQ9C0B0 810 aaKnown RBP15.28■□□□□ 0.04
SCN3B-201ENST00000299333 PTPRHQ9HD43 1115 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 PPP2R3BQ9Y5P8 575 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 HK2P52789 917 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 NPEPPSP55786 919 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 CCNIQ14094 377 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 GOLGA7BQ2TAP0 167 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 COA1Q9GZY4 146 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 SLC24A2Q9UI40 661 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 CROTQ9UKG9 612 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 EFCAB10A6NFE3 127 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 ROR2Q01974 943 aaKnown RBP15.28■□□□□ 0.04
SCN3B-201ENST00000299333 ZNF554Q86TJ5 538 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 KAT2BQ92831 832 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 TMEM121Q9BTD3 319 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 C8orf4Q9NR00 106 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 ABCB10Q9NRK6 738 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms