RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CAPRIN2Q6IMN6 1127 aaKnown RBP25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 PCDH19Q8TAB3 1148 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 PPP1R13LQ8WUF5 828 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 OXNAD1Q96HP4 312 aaPredicted RBP25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 CLPTM1LQ96KA5 538 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 SAR1AQ9NR31 198 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 LNPEPQ9UIQ6 1025 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 SIP14410 1827 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 CRADDP78560 199 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 SLC18A2Q05940 514 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 SLC26A11Q86WA9 606 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 TREML1Q86YW5 311 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 NRG4Q8WWG1 115 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 CENPFP49454 3210 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 EVPLQ92817 2033 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 METTL18O95568 372 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 C1QAP02745 245 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 STIP1P31948 543 aaKnown RBP25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 CCNG1P51959 295 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 KDSRQ06136 332 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 CHI3L2Q15782 390 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 WASHC2DQ5SRD0 308 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 PMF1Q6P1K2 205 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 FAM172AQ8WUF8 416 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 CNPY3Q9BT09 278 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 POPDC2Q9HBU9 364 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 LRRC42Q9Y546 428 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 H3BRJ5 948 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 NDC80O14777 642 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 EDNRBP24530 442 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 GMPRP36959 345 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 BLMHQ13867 455 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 AMHR2Q16671 573 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 MUM1Q2TAK8 710 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 SLC10A6Q3KNW5 377 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 CNTN3Q9P232 1028 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 PPARGC1AQ9UBK2 798 aaKnown RBP25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 MFHAS1Q9Y4C4 1052 aa25.34■■□□□ 1.65
SPTSSA-201ENST00000298130 IGKV6-21A0A0C4DH24 114 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 CXorf38Q8TB03 319 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 YIPF3Q9GZM5 350 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 BATF3Q9NR55 127 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 NMRK1Q9NWW6 199 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 E2F8A0AVK6 867 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 KIF1CO43896 1103 aaKnown RBP25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 OSBPP22059 807 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 GBE1Q04446 702 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 TTC39BQ5VTQ0 682 aaPredicted RBP25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 ACOT1Q86TX2 421 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 CLEC4CQ8WTT0 213 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 C2orf40Q9H1Z8 148 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 TLE6Q9H808 572 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 IFT122Q9HBG6 1241 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 ETNK2Q9NVF9 386 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 GINS2Q9Y248 185 aa25.33■■□□□ 1.65
SPTSSA-201ENST00000298130 SOCS7O14512 581 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 PFKMP08237 780 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 F7P08709 466 aaPredicted RBP25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 AMPD1P23109 780 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 CCNHP51946 323 aaPredicted RBP25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 GOLGA7BQ2TAP0 167 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 PPP1R26Q5T8A7 1209 aaPredicted RBP25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 ENDOVQ8N8Q3 282 aaKnown RBP25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 SHKBP1Q8TBC3 707 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 DNAJC9Q8WXX5 260 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 FAM167AQ96KS9 214 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 PGLYRP2Q96PD5 576 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 MMP19Q99542 508 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 SNRNP25Q9BV90 132 aaKnown RBP25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 FRMD8P1Q9BZ68 369 aaPredicted RBP25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 TXNRD2Q9NNW7 524 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 IL1RAPL1Q9NZN1 696 aa25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 MTO1Q9Y2Z2 717 aaKnown RBP25.33■■□□□ 1.64
SPTSSA-201ENST00000298130 CAPN9O14815 690 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 GCKP35557 465 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 CELF3Q5SZQ8 465 aaKnown RBP25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 C16orf46Q6P387 395 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 CCDC62Q6P9F0 684 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 UNC5AQ6ZN44 842 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 ZNF398Q8TD17 642 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 UCMAQ8WVF2 138 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 CEP41Q9BYV8 373 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 WASF2Q9Y6W5 498 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 PPEF2O14830 753 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 USP2O75604 605 aaPredicted RBP25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 RFPL1O75677 317 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 THOC5Q13769 683 aaKnown RBP25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 Q3C1V9 767 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 RIOX2Q8IUF8 465 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 DCLRE1BQ9H816 532 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 PCDH18Q9HCL0 1135 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 ARHGEF4Q9NR80 690 aa25.32■■□□□ 1.64
SPTSSA-201ENST00000298130 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.31■■□□□ 1.64
SPTSSA-201ENST00000298130 B2RBV5 119 aa25.31■■□□□ 1.64
SPTSSA-201ENST00000298130 APOL1O14791 398 aa25.31■■□□□ 1.64
SPTSSA-201ENST00000298130 TBX10O75333 385 aa25.31■■□□□ 1.64
SPTSSA-201ENST00000298130 ENDOD1O94919 500 aa25.31■■□□□ 1.64
SPTSSA-201ENST00000298130 ALDH18A1P54886 795 aaKnown RBP25.31■■□□□ 1.64
SPTSSA-201ENST00000298130 BSPRYQ5W0U4 402 aa25.31■■□□□ 1.64
SPTSSA-201ENST00000298130 ILDR2Q71H61 639 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms