RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 PAFAH2Q99487 392 aa15.15■□□□□ 0.02
GDF9-201ENST00000296875 PAIP2Q9BPZ3 127 aaKnown RBP15.15■□□□□ 0.02
GDF9-201ENST00000296875 MRPL45Q9BRJ2 306 aaKnown RBP15.15■□□□□ 0.02
GDF9-201ENST00000296875 DHRS4Q9BTZ2 278 aa15.15■□□□□ 0.02
GDF9-201ENST00000296875 PCDH18Q9HCL0 1135 aa15.15■□□□□ 0.02
GDF9-201ENST00000296875 PNPLA8Q9NP80 782 aa15.15■□□□□ 0.02
GDF9-201ENST00000296875 KLC4Q9NSK0 619 aa15.15■□□□□ 0.02
GDF9-201ENST00000296875 GINS2Q9Y248 185 aa15.15■□□□□ 0.02
GDF9-201ENST00000296875 GOLGA8MH3BSY2 632 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 KCNN4O15554 427 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 DYNC1LI2O43237 492 aaPredicted RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 HNRNPH1P31943 449 aaKnown RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 ARL4AP40617 200 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 RPL34P49207 117 aaKnown RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 CRYBB1P53674 252 aaPredicted RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 GDF10P55107 478 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 ZNF200P98182 395 aaPredicted RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 ATP11AP98196 1134 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 KCNJ11Q14654 390 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 FASTKD3Q14CZ7 662 aaKnown RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 DPYSL2Q16555 572 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 PMF1Q6P1K2 205 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 TTC30AQ86WT1 665 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 ANKMY2Q8IV38 441 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 VPS52Q8N1B4 723 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 TOP6BLQ8N6T0 577 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 CCDC63Q8NA47 563 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 MCUQ8NE86 351 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 ZNF398Q8TD17 642 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 KAT6AQ92794 2004 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 PEBP4Q96S96 227 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 SLC40A1Q9NP59 571 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 SLC38A7Q9NVC3 462 aa15.14■□□□□ 0.01
GDF9-201ENST00000296875 SAE1Q9UBE0 346 aaPredicted RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
GDF9-201ENST00000296875 M0QZ92 97 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 PIRO00625 290 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 RASSF9O75901 435 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 MT-ND3P03897 115 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 GCAP28676 217 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 PSMC4P43686 418 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 RGS7P49802 495 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 CDK16Q00536 496 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 PDE4CQ08493 712 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 PKN2Q16513 984 aaKnown RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 C15orf59Q2T9L4 293 aaPredicted RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 XKR4Q5GH76 650 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 SPDYAQ5MJ70 313 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 OLFML2BQ68BL8 750 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TLK2Q86UE8 772 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 ZC3H18Q86VM9 953 aaKnown RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 TRIM42Q8IWZ5 723 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 C12orf29Q8N999 325 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 DENND1AQ8TEH3 1009 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 OSMRQ99650 979 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 SNRNP25Q9BV90 132 aaKnown RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 XAB2Q9HCS7 855 aaKnown RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 RAB6BQ9NRW1 208 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TXLNGQ9NUQ3 528 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 FAM49BQ9NUQ9 324 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.13■□□□□ 0.01
GDF9-201ENST00000296875 USH1CQ9Y6N9 552 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 DNM1LO00429 736 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 XPO1O14980 1071 aaKnown RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 ADCY6O43306 1168 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TRPA1O75762 1119 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 KRT37O76014 449 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TROVE2P10155 538 aaKnown RBP eCLIP15.13■□□□□ 0.01
GDF9-201ENST00000296875 ALADP13716 330 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 CREB1P16220 341 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 KRT4P19013 534 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TAC1P20366 129 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 CYP2B6P20813 491 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 RGS2P41220 211 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 PSEN2P49810 448 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 RASSF2P50749 326 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 AIF1P55008 147 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 GPX6P59796 221 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 SNCBQ16143 134 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 SOWAHAQ2M3V2 549 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 SLC45A4Q5BKX6 768 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 FNBP1LQ5T0N5 605 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 FBXW10Q5XX13 1052 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TAF2Q6P1X5 1199 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 C1orf228Q6PIY5 440 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 CENPIQ92674 756 aaPredicted RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 MTBPQ96DY7 904 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 APBA2Q99767 749 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 VPS11Q9H270 941 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 TUBGCP4Q9UGJ1 667 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 GTF2IRD1Q9UHL9 959 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 ZNF180Q9UJW8 692 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 STAP1Q9ULZ2 295 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 GABRQQ9UN88 632 aa15.13■□□□□ 0.01
GDF9-201ENST00000296875 GNEQ9Y223 722 aaKnown RBP15.13■□□□□ 0.01
GDF9-201ENST00000296875 C17orf102A2RUQ5 167 aa15.12■□□□□ 0.01
GDF9-201ENST00000296875 PAPSS1O43252 624 aaPredicted RBP15.12■□□□□ 0.01
GDF9-201ENST00000296875 TYROBPO43914 113 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms