RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 FAM49AQ9H0Q0 323 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 UBP1Q9NZI7 540 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 STRIP2Q9ULQ0 834 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 RREB1Q92766 1687 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 ZC3H11AO75152 810 aaKnown RBP eCLIP13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 MT-CO1P00395 513 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 GLRBP48167 497 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 MCL1Q07820 350 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 ACVR2BQ13705 512 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 PPM1JQ5JR12 505 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 PTAR1Q7Z6K3 402 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 MPP5Q8N3R9 675 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 COPS5Q92905 334 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 SGF29Q96ES7 293 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 MARK4Q96L34 752 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 ZNF358Q9NW07 568 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 ARHGAP28Q9P2N2 729 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 LRCH1Q9Y2L9 728 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 LRRC42Q9Y546 428 aa13.81□□□□□ -0.2
TNFRSF21-201ENST00000296861 DCXO43602 365 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 HSPA4LO95757 839 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 NFICP08651 508 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ABHD2P08910 425 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 MLH1P40692 756 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 NME3Q13232 169 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 OLIG2Q13516 323 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 OASLQ15646 514 aaKnown RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 MMEL1Q495T6 779 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 TTC39BQ5VTQ0 682 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 IYDQ6PHW0 289 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 FAM131BQ86XD5 332 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 FAM172AQ8WUF8 416 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 USP13Q92995 863 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 HESX1Q9UBX0 185 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 PLA2G4CQ9UP65 541 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 A0A1B0GVG6 124 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 APOL1O14791 398 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 MED7O43513 233 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ADCY3O60266 1144 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 NELFEP18615 380 aaKnown RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 USP4Q13107 963 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ITGA9Q13797 1035 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 TFDP2Q14188 446 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 FASTKD1Q53R41 847 aaKnown RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 B3GNT9Q6UX72 402 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 DEFB107AQ8IZN7 70 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 NRG4Q8WWG1 115 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 NDRG1Q92597 394 aaKnown RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 GCNAQ96QF7 691 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ZNF184Q99676 751 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 FOXP3Q9BZS1 431 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ITGAVP06756 1048 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ENO3P13929 434 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ATF7IP2Q5U623 682 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 HEATR6Q6AI08 1181 aaKnown RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 RAB3IL1Q8TBN0 382 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ABTB1Q969K4 478 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 TEX13BQ9BXU2 312 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ETAA1Q9NY74 926 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 CLIC5Q9NZA1 410 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 PPM1HQ9ULR3 514 aa13.8□□□□□ -0.2
TNFRSF21-201ENST00000296861 ATRNL1Q5VV63 1379 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 KCNK1O00180 336 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 MICAL2O94851 1124 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 KCNA2P16389 499 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 TGFB2P61812 414 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 CMC1Q7Z7K0 106 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 SPATA24Q86W54 205 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 DCAKDQ8WVC6 231 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 NLRP7Q8WX94 980 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 ALKBH8Q96BT7 664 aaKnown RBP13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 CDHR1Q96JP9 859 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 PRM3Q9NNZ6 103 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 CYTH4Q9UIA0 394 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 TM9SF1O15321 606 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 AHCYL1O43865 530 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 PEX1O43933 1283 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 WFS1O76024 890 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 NPTXRO95502 500 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 GNAZP19086 355 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 PTPN11Q06124 597 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 TMEM132BQ14DG7 1078 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 CYTH1Q15438 398 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 ULK2Q8IYT8 1036 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 WDTC1Q8N5D0 677 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 CCNYL1Q8N7R7 359 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 LPAR1Q92633 364 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 ZNF333Q96JL9 665 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 KANSL3Q9P2N6 904 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 SNCAIPQ9Y6H5 919 aa13.79□□□□□ -0.2
TNFRSF21-201ENST00000296861 A6NHS1 94 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms