RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TRIM49P0CI25 452 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 TRIM49CP0CI26 452 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 ATP5C1P36542 298 aaKnown RBP20.71■□□□□ 0.91
CXCL3-201ENST00000296026 NFIL3Q16649 462 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 PREPLQ4J6C6 727 aaPredicted RBP20.71■□□□□ 0.91
CXCL3-201ENST00000296026 HTR3DQ70Z44 454 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 INTS8Q75QN2 995 aaKnown RBP20.71■□□□□ 0.91
CXCL3-201ENST00000296026 ZNF513Q8N8E2 541 aaPredicted RBP20.71■□□□□ 0.91
CXCL3-201ENST00000296026 TAS1R2Q8TE23 839 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 HMGB4Q8WW32 186 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 CYFIP2Q96F07 1278 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 SPACA7Q96KW9 195 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 NT5C1AQ9BXI3 368 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 KLF16Q9BXK1 252 aaPredicted RBP20.71■□□□□ 0.91
CXCL3-201ENST00000296026 CYP3A43Q9HB55 503 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 APOBEC3GQ9HC16 384 aaKnown RBP20.71■□□□□ 0.91
CXCL3-201ENST00000296026 SCML2Q9UQR0 700 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 ZDHHC9Q9Y397 364 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 FAM237AA0A1B0GTK4 181 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 TCRBV21S2A2A0A5A6 115 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 PATE3B3GLJ2 98 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 CYP26A1O43174 497 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 MAP3K13O43283 966 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 GREM1O60565 184 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 KRT13P13646 458 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 ACO1P21399 889 aaKnown RBP20.7■□□□□ 0.9
CXCL3-201ENST00000296026 PPP3CAQ08209 521 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 DPYDQ12882 1025 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 C10orf76Q5T2E6 689 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 NUDT18Q6ZVK8 323 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 FAM186BQ8IYM0 893 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 PGBD3Q8N328 593 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 FRMD1Q8N878 549 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 TERB1Q8NA31 727 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 KCNV2Q8TDN2 545 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 PIGKQ92643 395 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 MMRN2Q9H8L6 949 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 CYLDQ9NQC7 956 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 OSER1Q9NX31 292 aa20.7■□□□□ 0.9
CXCL3-201ENST00000296026 TRIM24O15164 1050 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 CD58P19256 250 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 PMLP29590 882 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 GOLGA8FQ08AF8 430 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 GOLGA8DPQ0D2H9 430 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 LPCAT2Q7L5N7 544 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 TRMT11Q7Z4G4 463 aaKnown RBP20.69■□□□□ 0.9
CXCL3-201ENST00000296026 NIF3L1Q9GZT8 377 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 NMUR1Q9HB89 426 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 PNPLA8Q9NP80 782 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 LSM7Q9UK45 103 aaKnown RBP20.69■□□□□ 0.9
CXCL3-201ENST00000296026 ANGPTL2Q9UKU9 493 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 PCDHA5Q9Y5H7 936 aa20.69■□□□□ 0.9
CXCL3-201ENST00000296026 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 A0A1W2PQH9 124 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 NEDD8-MDP1E9PL57 170 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 CILPO75339 1184 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 KRT37O76014 449 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 RPL13P26373 211 aaKnown RBP20.68■□□□□ 0.9
CXCL3-201ENST00000296026 PSMC2P35998 433 aaKnown RBP20.68■□□□□ 0.9
CXCL3-201ENST00000296026 IRX4P78413 519 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 ADAM9Q13443 819 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 BYSLQ13895 437 aaKnown RBP20.68■□□□□ 0.9
CXCL3-201ENST00000296026 MAP7D1Q3KQU3 841 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 DAB2IPQ5VWQ8 1189 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 GRAMD4Q6IC98 578 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 PSAPL1Q6NUJ1 521 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 KRBA2Q6ZNG9 492 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 TPGS1Q6ZTW0 290 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 ARMCX6Q7L4S7 300 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 TMEFF1Q8IYR6 380 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 GUF1Q8N442 669 aaKnown RBP20.68■□□□□ 0.9
CXCL3-201ENST00000296026 CCDC150Q8NCX0 1101 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 BBS2Q9BXC9 721 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 DNAJC17Q9NVM6 304 aaKnown RBP20.68■□□□□ 0.9
CXCL3-201ENST00000296026 MBD1Q9UIS9 605 aaPredicted RBP20.68■□□□□ 0.9
CXCL3-201ENST00000296026 NUDT5Q9UKK9 219 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 HCN2Q9UL51 889 aa20.68■□□□□ 0.9
CXCL3-201ENST00000296026 MDM4O15151 490 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 RARGP13631 454 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 TYRP14679 529 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 WASP42768 502 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 ENPEPQ07075 957 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 XPO6Q96QU8 1125 aaKnown RBP20.67■□□□□ 0.9
CXCL3-201ENST00000296026 TMEM8AQ9HCN3 771 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 TMEM9BQ9NQ34 198 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.67■□□□□ 0.9
CXCL3-201ENST00000296026 WDR35Q9P2L0 1181 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 DNMT3LQ9UJW3 386 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 STARD13Q9Y3M8 1113 aa20.67■□□□□ 0.9
CXCL3-201ENST00000296026 TPRP12270 2363 aaKnown RBP20.67■□□□□ 0.9
CXCL3-201ENST00000296026 ACACBO00763 2458 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 CACNG3O60359 315 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 HOXB2P14652 356 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 GABRG2P18507 467 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 NTSR1P30989 418 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 PTGER3P43115 390 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 PLA2G4AP47712 749 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 NOVA1P51513 510 aaKnown RBP20.66■□□□□ 0.9
CXCL3-201ENST00000296026 KIF11P52732 1056 aa20.66■□□□□ 0.9
CXCL3-201ENST00000296026 ST3GAL2Q16842 350 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms