RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 ZNF670Q9BS34 389 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 FRMD8Q9BZ67 464 aaPredicted RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CCDC134Q9H6E4 229 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 LRRC4CQ9HCJ2 640 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 NGRNQ9NPE2 291 aaKnown RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 INTS9Q9NV88 658 aaKnown RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 FETUBQ9UGM5 382 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 RRP15Q9Y3B9 282 aaKnown RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 NME7Q9Y5B8 376 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CDY2AQ9Y6F7 541 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PIK3R2O00459 728 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 CYB561D2O14569 222 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 SPTLC1O15269 473 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 GRAP2O75791 330 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 ALDH1A1P00352 501 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 RARBP10826 455 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 FGFR1P11362 822 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 CYBAP13498 195 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 ATP2A2P16615 1042 aaKnown RBP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 ADORA2BP29275 332 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 RPL9P32969 192 aaKnown RBP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 RPL22P35268 128 aaKnown RBP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 LHX1P48742 406 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 NR2C2P49116 596 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 CTCFP49711 727 aaPredicted RBP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 SEC24CP53992 1094 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 ATP11AP98196 1134 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 CBLBQ13191 982 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 RASA2Q15283 850 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 TAF5Q15542 800 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 NBPF20Q3BBV1 942 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 ANKRD20A8PQ5CZ79 823 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 SH3PXD2AQ5TCZ1 1133 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 STRADAQ7RTN6 431 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 CPLX4Q7Z7G2 160 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 PRUNE1Q86TP1 453 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 EXOC3L1Q86VI1 746 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 PSTKQ8IV42 348 aaKnown RBP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 ANKLE1Q8NAG6 615 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 B3GALNT2Q8NCR0 500 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 TRPV1Q8NER1 839 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 PPP1R13LQ8WUF5 828 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 KCTD13Q8WZ19 329 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 CHMP6Q96FZ7 201 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 C9orf72Q96LT7 481 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 DUSP16Q9BY84 665 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 DPEP3Q9H4B8 488 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 DNAJC17Q9NVM6 304 aaKnown RBP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 PAK5Q9P286 719 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 SAE1Q9UBE0 346 aaPredicted RBP9.64□□□□□ -0.87
CLRN1-201ENST00000295911 SLC24A2Q9UI40 661 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 GIT1Q9Y2X7 761 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 TLL2Q9Y6L7 1015 aa9.64□□□□□ -0.87
CLRN1-201ENST00000295911 EXOC1LA0A1B0GW35 172 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 BCLAF3A2AJT9 711 aaKnown RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 C5orf60A6NFR6 353 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 FAM155AB1AL88 458 aaPredicted RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 H7C0C1 242 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 TULP2O00295 520 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 GABRDO14764 452 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 SEPT4O43236 478 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 ZNF189O75820 626 aaPredicted RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 KIAA0754O94854 1291 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 THP07101 528 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 LCP1P13796 627 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 CCDC130P13994 396 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 PTPN1P18031 435 aaKnown RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 LMO2P25791 158 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 MATKP42679 507 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 ATP5OP48047 213 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 HDAC4P56524 1084 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 BCAR1P56945 870 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 CORO7P57737 925 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 SOX4Q06945 474 aaPredicted RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 PDIA2Q13087 525 aaKnown RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 XRCC4Q13426 336 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 DPYSL2Q16555 572 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 UBAP2Q5T6F2 1119 aaKnown RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 GKAP1Q5VSY0 366 aaPredicted RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 SLC9A4Q6AI14 798 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 CYP4F22Q6NT55 531 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 TRAF7Q6Q0C0 670 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 LIAT1Q6ZQX7 453 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 BZW1Q7L1Q6 419 aaKnown RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
CLRN1-201ENST00000295911 SERINC5Q86VE9 423 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 UNC45BQ8IWX7 931 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 PDIK1LQ8N165 341 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 PLD5Q8N7P1 536 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 NAT8LQ8N9F0 302 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 FAM71DQ8N9W8 422 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 ARRDC4Q8NCT1 418 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 MDM1Q8TC05 714 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 SLC2A14Q8TDB8 520 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 PYROXD1Q8WU10 500 aa9.63□□□□□ -0.87
CLRN1-201ENST00000295911 ATXN2LQ8WWM7 1075 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms