RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 RAB6BQ9NRW1 208 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 NKIRAS1Q9NYS0 192 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 CLUHO75153 1309 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 TCP11X1B4DZS4 312 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 SPAG7O75391 227 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 ZBED1O96006 694 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 TGM2P21980 687 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 WARSP23381 471 aaKnown RBP14.57□□□□□ -0.08
NXF1-201ENST00000294172 CYP2F1P24903 491 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 SLC8A3P57103 927 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 RNASELQ05823 741 aaKnown RBP14.57□□□□□ -0.08
NXF1-201ENST00000294172 ADIGQ0VDE8 80 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 PKN2Q16513 984 aaKnown RBP14.57□□□□□ -0.08
NXF1-201ENST00000294172 SLC9A4Q6AI14 798 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 FUKQ8N0W3 1084 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 ATP11CQ8NB49 1132 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 FAF2Q96CS3 445 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 PPP1R10Q96QC0 940 aaKnown RBP14.57□□□□□ -0.08
NXF1-201ENST00000294172 GAD1Q99259 594 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 NCAPGQ9BPX3 1015 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 PAIP2Q9BPZ3 127 aaKnown RBP14.57□□□□□ -0.08
NXF1-201ENST00000294172 WDR83Q9BRX9 315 aaKnown RBP14.57□□□□□ -0.08
NXF1-201ENST00000294172 ZNF670Q9BS34 389 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 MED10Q9BTT4 135 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 USP29Q9HBJ7 922 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.57□□□□□ -0.08
NXF1-201ENST00000294172 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 GGA2Q9UJY4 613 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 AP4E1Q9UPM8 1137 aa14.57□□□□□ -0.08
NXF1-201ENST00000294172 SYNJ2BP-COX16A0A087WUM0 186 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 BEST1O76090 585 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 IGHA2P01877 340 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 PTPN1P18031 435 aaKnown RBP14.56□□□□□ -0.08
NXF1-201ENST00000294172 L1CAMP32004 1257 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 STX2P32856 288 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 PHBP35232 272 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 EFTUD2Q15029 972 aaKnown RBP eCLIP14.56□□□□□ -0.088e-7■■■■■ 38.2
NXF1-201ENST00000294172 FAXCQ5TGI0 409 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 CCDC121Q6ZUS5 278 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 LIMS2Q7Z4I7 341 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 RSPH3Q86UC2 560 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 CCDC185Q8N715 623 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 CENPIQ92674 756 aaPredicted RBP14.56□□□□□ -0.08
NXF1-201ENST00000294172 C11orf84Q9BUA3 381 aaPredicted RBP14.56□□□□□ -0.08
NXF1-201ENST00000294172 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
NXF1-201ENST00000294172 NRDE2Q9H7Z3 1164 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 KIF9Q9HAQ2 790 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 FAM105AQ9NUU6 356 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 COX16Q9P0S2 106 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 CHMP2BQ9UQN3 213 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 TIMM13Q9Y5L4 95 aaPredicted RBP14.56□□□□□ -0.08
NXF1-201ENST00000294172 TRPV2Q9Y5S1 764 aa14.56□□□□□ -0.08
NXF1-201ENST00000294172 XPO1O14980 1071 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 SLC10A3P09131 477 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 LRPAP1P30533 357 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 INHBEP58166 350 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 MDH1BQ5I0G3 518 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 ARHGEF18Q6ZSZ5 1173 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 YTHDF3Q7Z739 585 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 TRABD2AQ86V40 505 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 FAM131BQ86XD5 332 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 DEFB106AQ8N104 65 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 CCDC197Q8NCU1 140 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 FBF1Q8TES7 1133 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 HNRNPABQ99729 332 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 DUSP16Q9BY84 665 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 RABGEF1Q9UJ41 708 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 ACTL7BQ9Y614 415 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 ATXN2Q99700 1313 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 PDCD11Q14690 1871 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 GOLGA6L7A0A1B0GV03 622 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 AVILO75366 819 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 CHRNA1P02708 482 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 RPL34P49207 117 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 NDUFV1P49821 464 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 SULT1E1P49888 294 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 RABGGTBP53611 331 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 GEMIN4P57678 1058 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 GBE1Q04446 702 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 DPYSL2Q16555 572 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 DCAF6Q58WW2 860 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 EFHC1Q5JVL4 640 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 TDRPQ86YL5 185 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 C4orf33Q8N1A6 199 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 PYROXD2Q8N2H3 581 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 TRIB2Q92519 343 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 SENP8Q96LD8 212 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 KCTD15Q96SI1 283 aaPredicted RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 NSRP1Q9H0G5 558 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 TRABDQ9H4I3 376 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 LRRC4Q9HBW1 653 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 DDX43Q9NXZ2 648 aaKnown RBP14.55□□□□□ -0.08
NXF1-201ENST00000294172 PAK5Q9P286 719 aa14.55□□□□□ -0.08
NXF1-201ENST00000294172 FAM47DPA6NHR8 397 aa14.54□□□□□ -0.08
NXF1-201ENST00000294172 E7ESA3 106 aa14.54□□□□□ -0.08
NXF1-201ENST00000294172 SMAPO00193 183 aa14.54□□□□□ -0.08
NXF1-201ENST00000294172 KPNA6O60684 536 aa14.54□□□□□ -0.08
NXF1-201ENST00000294172 NPR3P17342 541 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms