RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 WSCD1Q658N2 575 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 SYDE1Q6ZW31 735 aaPredicted RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 TLK2Q86UE8 772 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 BBS5Q8N3I7 341 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 STAMBPL1Q96FJ0 436 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 SLITRK1Q96PX8 696 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 SCOCQ9UIL1 159 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 A0A1B0GUL6 1792 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 ERBB2P04626 1255 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 CXCR3P49682 368 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 VCPP55072 806 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 NR1H3Q13133 447 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 HSP90AA5PQ58FG0 334 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 FBXO47Q5MNV8 452 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 CELF3Q5SZQ8 465 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 DAW1Q8N136 415 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 RNF217Q8TC41 542 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 ABTB1Q969K4 478 aaPredicted RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 HES6Q96HZ4 224 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 ACO2Q99798 780 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 TMEM120AQ9BXJ8 343 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 WDR35Q9P2L0 1181 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 SNX10Q9Y5X0 201 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 IGKV6D-41A0A0C4DH26 115 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 HCRTO43612 131 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 ZCCHC18P0CG32 403 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 VDRP11473 427 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 CAPRIN1Q14444 709 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 KBTBD12Q3ZCT8 623 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 DCAF12L1Q5VU92 463 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 KCNT2Q6UVM3 1135 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 UNC45BQ8IWX7 931 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 DEFB106AQ8N104 65 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 GBP7Q8N8V2 638 aaPredicted RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 GANCQ8TET4 914 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 USP13Q92995 863 aaPredicted RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 APOL5Q9BWW9 433 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 NT5MQ9NPB1 228 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 SMPD4Q9NXE4 827 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 ARHGEF38Q9NXL2 777 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 HMGXB4Q9UGU5 601 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 BARX2Q9UMQ3 279 aaPredicted RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 ZC3H4Q9UPT8 1303 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 KLRG2A4D1S0 409 aaPredicted RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 DDX3YO15523 660 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 DNAJC6O75061 913 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 CD4P01730 458 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 APOEP02649 317 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 POLBP06746 335 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 CCNG2Q16589 344 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 ZCWPW2Q504Y3 356 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 KRT80Q6KB66 452 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 CACUL1Q86Y37 369 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 MIER2Q8N344 545 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 PPHLN1Q8NEY8 458 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 DNERQ8NFT8 737 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 DIS3LQ8TF46 1054 aaKnown RBP4.95□□□□□ -1.62
UBR1-201ENST00000290650 RUBCNQ92622 972 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 VPS39Q96JC1 886 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 LGMNQ99538 433 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 CDT1Q9H211 546 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 MAN1C1Q9NR34 630 aa4.95□□□□□ -1.62
UBR1-201ENST00000290650 SLC26A4O43511 780 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ANP32DO95626 131 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PIRTP0C851 137 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 CHRNB2P17787 502 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 KCNJ2P63252 427 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SATB1Q01826 763 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ACVR2BQ13705 512 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 MORF4L2Q15014 288 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SPDYAQ5MJ70 313 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 RDM1Q8NG50 284 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ZFP42Q96MM3 310 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 CPXM1Q96SM3 734 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 MYLK2Q9H1R3 596 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 GBA2Q9HCG7 927 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 UTP6Q9NYH9 597 aaKnown RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ARHGAP26Q9UNA1 814 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 DNAJC16Q9Y2G8 782 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 MROH7Q68CQ1 1323 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 PRR23AA6NEV1 266 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SUPT3HB4E1H0 165 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 NT5C1B-RDH14C9J2C7 533 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PRRG1O14668 218 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ASAP2O43150 1006 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SUPT3HO75486 399 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 PDE5AO76074 875 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 FARP2O94887 1054 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 ZFXP17010 805 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 GOT1P17174 413 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 FECHP22830 423 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 KDELR1P24390 212 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 MSX2P35548 267 aaPredicted RBP4.94□□□□□ -1.62
UBR1-201ENST00000290650 BRSK2Q8IWQ3 736 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 APBA2Q99767 749 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 CNPY3Q9BT09 278 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 ANGPTL2Q9UKU9 493 aa4.94□□□□□ -1.62
UBR1-201ENST00000290650 SMG5Q9UPR3 1016 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms