RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CSNK1G1Q9HCP0 422 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 TMEM9BQ9NQ34 198 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 DNAJC17Q9NVM6 304 aaKnown RBP14.82□□□□□ -0.04
TPM1-202ENST00000288398 WDR35Q9P2L0 1181 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 MAPK8IP1Q9UQF2 711 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 SCML2Q9UQR0 700 aa14.82□□□□□ -0.04
TPM1-202ENST00000288398 C4orf47A7E2U8 309 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 CYP26A1O43174 497 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 STX10O60499 249 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 RHOBTB3O94955 611 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 TRIM49P0CI25 452 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 TRIM49CP0CI26 452 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 RALAP11233 206 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 HOXB2P14652 356 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 BCKDHBP21953 392 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 KIR2DL1P43626 348 aaPredicted RBP14.81□□□□□ -0.04
TPM1-202ENST00000288398 PSEN1P49768 467 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 NOVA1P51513 510 aaKnown RBP14.81□□□□□ -0.04
TPM1-202ENST00000288398 NDUFA8P51970 172 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 LMAN2Q12907 356 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 ADAM9Q13443 819 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 ST3GAL2Q16842 350 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 C10orf120Q5SQS8 335 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 N4BP2L1Q5TBK1 243 aaPredicted RBP14.81□□□□□ -0.04
TPM1-202ENST00000288398 EMC10Q5UCC4 262 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 PSAPL1Q6NUJ1 521 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 ARMCX6Q7L4S7 300 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 TMEM25Q86YD3 366 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 SFTPA1Q8IWL2 248 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 TERB1Q8NA31 727 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 ZMIZ2Q8NF64 920 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 RLN3Q8WXF3 142 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 CDK5RAP1Q96SZ6 601 aaKnown RBP14.81□□□□□ -0.04
TPM1-202ENST00000288398 DUSP9Q99956 384 aaKnown RBP14.81□□□□□ -0.04
TPM1-202ENST00000288398 PNPLA8Q9NP80 782 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 DNMT3LQ9UJW3 386 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 NAGPAQ9UK23 515 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 HPSEQ9Y251 543 aa14.81□□□□□ -0.04
TPM1-202ENST00000288398 A0A0A0MRY4 1105 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 LNP1A1A4G5 178 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 AP5Z1O43299 807 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 BEST1O76090 585 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 KCNK5O95279 499 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 EPB41P11171 864 aaKnown RBP14.8□□□□□ -0.04
TPM1-202ENST00000288398 RARGP13631 454 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 NTSR1P30989 418 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 P2RY2P41231 377 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 PLA2G4AP47712 749 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 ATXN3P54252 364 aaPredicted RBP14.8□□□□□ -0.04
TPM1-202ENST00000288398 ENPEPQ07075 957 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 INCA1Q0VD86 236 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 NFIL3Q16649 462 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 LYSMD4Q5XG99 296 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 SLC36A4Q6YBV0 504 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 TPGS1Q6ZTW0 290 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 CLEC20AQ6ZU45 233 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 HTR3DQ70Z44 454 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 ETFBKMTQ8IXQ9 262 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 TMEFF1Q8IYR6 380 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 CHPFQ8IZ52 775 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 GUF1Q8N442 669 aaKnown RBP14.8□□□□□ -0.04
TPM1-202ENST00000288398 OLIG1Q8TAK6 271 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 TMEM8AQ9HCN3 771 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 ZDHHC4Q9NPG8 344 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 CYLDQ9NQC7 956 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 KIAA1549LQ6ZVL6 1849 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 MYO16Q9Y6X6 1858 aa14.8□□□□□ -0.04
TPM1-202ENST00000288398 A0A1W2PQH9 124 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 ACACBO00763 2458 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 TBX18O95935 607 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 TYRP14679 529 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 GTF2H1P32780 548 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 WASP42768 502 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 EML5Q05BV3 1969 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 MESP2Q0VG99 397 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 UAP1L1Q3KQV9 507 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 ZNF394Q53GI3 561 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 TRIM61Q5EBN2 209 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 SPDYCQ5MJ68 293 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 KRT39Q6A163 491 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 KRBA2Q6ZNG9 492 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 MIB1Q86YT6 1006 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 ARHGAP18Q8N392 663 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 TAS1R2Q8TE23 839 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 HEXIM2Q96MH2 286 aaKnown RBP14.79□□□□□ -0.04
TPM1-202ENST00000288398 KLF16Q9BXK1 252 aaPredicted RBP14.79□□□□□ -0.04
TPM1-202ENST00000288398 RMND1Q9NWS8 449 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 ZNF510Q9Y2H8 683 aa14.79□□□□□ -0.04
TPM1-202ENST00000288398 TPRP12270 2363 aaKnown RBP14.78□□□□□ -0.04
TPM1-202ENST00000288398 A0A1W2PQ27 194 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 A0A1W2PQ64 194 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 A0A1W2PQD8 194 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 GOLGA6L4A6NEF3 574 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 ANTXRLA6NF34 631 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 TM4SF5O14894 197 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 CETN3O15182 167 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 CACNG3O60359 315 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 ADAM23O75077 832 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms