RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SOX4Q06945 474 aaPredicted RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 INCA1Q0VD86 236 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 NFX1Q12986 1120 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 SLC1A5Q15758 541 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 TSNAXIP1Q2TAA8 658 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 SMTNL2Q2TAL5 461 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 TRIM68Q6AZZ1 485 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 OTOAQ7RTW8 1153 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 RCOR2Q8IZ40 523 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 ALLCQ8N6M5 410 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 ARFGAP1Q8N6T3 406 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 RBM41Q96IZ5 413 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 DCLRE1BQ9H816 532 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 VPS37BQ9H9H4 285 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 CACNG4Q9UBN1 327 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 ZMYND8Q9ULU4 1186 aaPredicted RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 Q9Y3F1 56 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 SMIM28A0A1B0GU29 152 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 PCK1P35558 622 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 CDC42EP1Q00587 391 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 RNASELQ05823 741 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 NBPF20Q3BBV1 942 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 TAF1BQ53T94 588 aaPredicted RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 FAM47CQ5HY64 1035 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 ZNF618Q5T7W0 954 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 ANO7Q6IWH7 933 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 NLRP9Q7RTR0 991 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 ZNF75CPQ92670 426 aaPredicted RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 PLEKHA5Q9HAU0 1116 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 FETUBQ9UGM5 382 aa19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 DRG1Q9Y295 367 aaKnown RBP19.07■□□□□ 0.64
PDLIM3-201ENST00000284767 SPTLC1O15269 473 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 DUSP11O75319 330 aaKnown RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 CBX6O95503 412 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 RGS7P49802 495 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 ARSEP51690 589 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 ZC3H12AQ5D1E8 599 aaKnown RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 KCNT1Q5JUK3 1230 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 PPP1R26Q5T8A7 1209 aaPredicted RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 MFSD7Q6UXD7 560 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 CENPUQ71F23 418 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 NT5DC4Q86YG4 428 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 KATNAL1Q9BW62 490 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 NT5C1AQ9BXI3 368 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 DPEP3Q9H4B8 488 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 CNTN3Q9P232 1028 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 DNPEPQ9ULA0 475 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 SHOC2Q9UQ13 582 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 ZNF148Q9UQR1 794 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 TJP3O95049 919 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 VDRP11473 427 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 ATF7P17544 494 aaPredicted RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 PSMA2P25787 234 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 PTDSS1P48651 473 aaKnown RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 RAB6CQ53S08 254 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 C9orf57Q5W0N0 161 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 GDF6Q6KF10 455 aaPredicted RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 SMG8Q8ND04 991 aaKnown RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 ZFP42Q96MM3 310 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 RAB6CQ9H0N0 254 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 DENND2DQ9H6A0 471 aaPredicted RBP19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 IPPQ9Y573 584 aa19.06■□□□□ 0.64
PDLIM3-201ENST00000284767 GRAP2O75791 330 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 KRT1P04264 644 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 PFKMP08237 780 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 TROVE2P10155 538 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 HOXC8P31273 242 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 TM4SF4P48230 202 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 CRYBB1P53674 252 aaPredicted RBP19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 GPS1Q13098 491 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 FASTKD3Q14CZ7 662 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 C11orf91Q3C1V1 193 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 TWF2Q6IBS0 349 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 LVRNQ6Q4G3 990 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 TUBB6Q9BUF5 446 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 ZWILCHQ9H900 591 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 AOC2O75106 756 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 IL1R2P27930 398 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 SOWAHAQ2M3V2 549 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 EFHC2Q5JST6 749 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 ZBED8Q8IZ13 594 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 GLIS1Q8NBF1 620 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 BEST2Q8NFU1 509 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 STRIP2Q9ULQ0 834 aa19.05■□□□□ 0.64
PDLIM3-201ENST00000284767 SIGLEC16A6NMB1 481 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 E5RJQ4 531 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 PDGFRBP09619 1106 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 ELNP15502 786 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 LBRQ14739 615 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 GOLGA7BQ2TAP0 167 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 RNASEH2BQ5TBB1 312 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 SH3PXD2AQ5TCZ1 1133 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 CLNKQ7Z7G1 428 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 DNAJC9Q8WXX5 260 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 HAUS1Q96CS2 278 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 SLITRK1Q96PX8 696 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 MAK16Q9BXY0 300 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 PHACTR1Q9C0D0 580 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 LRCH4O75427 683 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 STAU1O95793 577 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms