RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 MAP9Q49MG5 647 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 RTP2Q5QGT7 225 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.58
GGPS1-201ENST00000282841 ZDHHC24Q6UX98 284 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 SLC26A9Q7LBE3 791 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 FNIP1Q8TF40 1166 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 FTHL17Q9BXU8 183 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 LRRC19Q9H756 370 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.58
GGPS1-201ENST00000282841 GRHL1Q9NZI5 618 aa11.46□□□□□ -0.58
GGPS1-201ENST00000282841 HHLA1C9JL84 531 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 TJP3O95049 919 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 KRT7P08729 469 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 IL4RP24394 825 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 OAS2P29728 719 aaKnown RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 ADCY8P40145 1251 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 DPYSL3Q14195 570 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 OTUD1Q5VV17 481 aaPredicted RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 UBLCP1Q8WVY7 318 aaPredicted RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 ACBD6Q9BR61 282 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 CRISPLD1Q9H336 500 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 CENPHQ9H3R5 247 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 PIGVQ9NUD9 493 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 ETNK2Q9NVF9 386 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 MARCH5Q9NX47 278 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 PCYOX1Q9UHG3 505 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 TRIM43BA6NCK2 446 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 GOLGA8MH3BSY2 632 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 I6L893 689 aaPredicted RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 AGPSO00116 658 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 SGK1O00141 431 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 ADAM12O43184 909 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 ALDH2P05091 517 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 MCM3P25205 808 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 C1QTNF8P60827 252 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 BYSLQ13895 437 aaKnown RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 CYP1B1Q16678 543 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 SPOUT1Q5T280 376 aaKnown RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 SPATA2LQ8IUW3 424 aaPredicted RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 TP53INP2Q8IXH6 220 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 THEM5Q8N1Q8 247 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 STK32AQ8WU08 396 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 TRIM43Q96BQ3 446 aaPredicted RBP11.45□□□□□ -0.58
GGPS1-201ENST00000282841 SMARCD1Q96GM5 515 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 HSFY1Q96LI6 401 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 ADAM28Q9UKQ2 775 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 FAN1Q9Y2M0 1017 aa11.45□□□□□ -0.58
GGPS1-201ENST00000282841 ZNF638Q14966 1978 aaKnown RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 LIASO43766 372 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 CREB3O43889 395 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 CHKAP35790 457 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 GSCP56915 257 aaPredicted RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 TSPY1Q01534 308 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 GAD2Q05329 585 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 MTMR3Q13615 1198 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 CTXN3Q4LDR2 81 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 LRRC38Q5VT99 294 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 KCTD16Q68DU8 428 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 FAM171BQ6P995 826 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 ANKRD33Q7Z3H0 272 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 KRT222Q8N1A0 295 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 CMASQ8NFW8 434 aaPredicted RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 FAM72CH0Y354 149 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 TP73O15350 636 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 MSI1O43347 362 aaKnown RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 ZBED1O96006 694 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 GOT1P17174 413 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 MATKP42679 507 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 DAOAP59103 153 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 USP46P62068 366 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 DHX34Q14147 1143 aaKnown RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 UAP1Q16222 522 aaPredicted RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 FAM72AQ5TYM5 149 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 FAM72DQ6L9T8 149 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 DNAJC14Q6Y2X3 702 aaPredicted RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 FAM72BQ86X60 149 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 UNC45BQ8IWX7 931 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 FAM71DQ8N9W8 422 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 PCDH19Q8TAB3 1148 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 AUTS2Q8WXX7 1259 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 ZIM3Q96PE6 472 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 PKMYT1Q99640 499 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 MAK16Q9BXY0 300 aaKnown RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 RAB17Q9H0T7 212 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 PCDH18Q9HCL0 1135 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 ZDHHC18Q9NUE0 388 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 DDX56Q9NY93 547 aaKnown RBP11.44□□□□□ -0.58
GGPS1-201ENST00000282841 SFMBT1Q9UHJ3 866 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 PRUNE2Q8WUY3 3088 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 VWA8A3KMH1 1905 aa11.44□□□□□ -0.58
GGPS1-201ENST00000282841 SMIM23A6NLE4 172 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 CYP11A1P05108 521 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 GALTP07902 379 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 HSPA8P11142 646 aaKnown RBP11.43□□□□□ -0.58
GGPS1-201ENST00000282841 AMPD1P23109 780 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 CETN2P41208 172 aa11.43□□□□□ -0.58
GGPS1-201ENST00000282841 ATL2Q8NHH9 583 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms