RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 FOXP3Q9BZS1 431 aa12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 UNKQ9C0B0 810 aaKnown RBP12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 ARMCX1Q9P291 453 aa12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 ITGA11Q9UKX5 1188 aa12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 PCNTO95613 3336 aa12.32□□□□□ -0.44
SLC13A3-201ENST00000279027 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 HAUS5O94927 633 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 GTF2A2P52657 109 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 ELF3P78545 371 aaPredicted RBP12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 SLC6A3Q01959 620 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 GNASQ5JWF2 1037 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 PLEKHH3Q7Z736 793 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 CDKL3Q8IVW4 592 aaPredicted RBP12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 GBP7Q8N8V2 638 aaPredicted RBP12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 CDKL2Q92772 493 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 LPPQ93052 612 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 TSNARE1Q96NA8 513 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 DCTN3O75935 186 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 KRT38O76015 456 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 NCAM1P13591 858 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 GOT1P17174 413 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 ALDH18A1P54886 795 aaKnown RBP12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 GPR142Q7Z601 462 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 CFAP61Q8NHU2 1237 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 CYB561D2O14569 222 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 GYG2O15488 501 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 ENO1P06733 434 aaKnown RBP12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 ATICP31939 592 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 GRIA1P42261 906 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 TAF6P49848 677 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 RASSF2P50749 326 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 HUNKP57058 714 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 CHI3L2Q15782 390 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 ADGRF2Q8IZF7 708 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 SENP1Q9P0U3 644 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
SLC13A3-201ENST00000279027 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 UGT1A9O60656 530 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 CNMDO75829 334 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 EML3Q32P44 896 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 C6orf89Q6UWU4 347 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 YTHDF3Q7Z739 585 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 RIBC1Q8N443 379 aaPredicted RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 ARFGAP1Q8N6T3 406 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 ATP2A3Q93084 1043 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 UGT1A7Q9HAW7 530 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 UGT1A10Q9HAW8 530 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 UGT1A8Q9HAW9 530 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.3□□□□□ -0.447e-7■■■□□ 16.1
SLC13A3-201ENST00000279027 UBQLN1Q9UMX0 589 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 TPH1P17752 444 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 NCF2P19878 526 aaPredicted RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 ZNF132P52740 706 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 CLDN10P78369 228 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 TCEAL1Q15170 157 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 WSCD1Q658N2 575 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 ECHDC2Q86YB7 292 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 IGDCC3Q8IVU1 814 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 CELF6Q96J87 481 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 SLC17A6Q9P2U8 582 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 MFHAS1Q9Y4C4 1052 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 WDR27A2RRH5 827 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 TREHO43280 583 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 ATP6V1G2O95670 118 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 KRT16P08779 473 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 EDNRBP24530 442 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 GPX6P59796 221 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 SLC25A11Q02978 314 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 OASLQ15646 514 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 EFHC2Q5JST6 749 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 PLD5Q8N7P1 536 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 TNIP3Q96KP6 325 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 ZMAT2Q96NC0 199 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 TBCBQ99426 244 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 PCDH18Q9HCL0 1135 aa12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 FNDC3AQ9Y2H6 1198 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-201ENST00000279027 EVPLQ92817 2033 aa12.29□□□□□ -0.44
SLC13A3-201ENST00000279027 PAPSS1O43252 624 aaPredicted RBP12.29□□□□□ -0.44
SLC13A3-201ENST00000279027 SNRPAP09012 282 aaKnown RBP12.29□□□□□ -0.44
SLC13A3-201ENST00000279027 SMIM10L2AP0DMW4 78 aa12.29□□□□□ -0.44
SLC13A3-201ENST00000279027 SMIM10L2BP0DMW5 78 aa12.29□□□□□ -0.44
SLC13A3-201ENST00000279027 TYK2P29597 1187 aa12.29□□□□□ -0.44
SLC13A3-201ENST00000279027 NDUFV1P49821 464 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms