RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 LPPQ93052 612 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 B3GNT5Q9BYG0 378 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 DHX33Q9H6R0 707 aaKnown RBP14.85□□□□□ -0.03
TMEM47-201ENST00000275954 STOML1Q9UBI4 398 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.85□□□□□ -0.03
TMEM47-201ENST00000275954 A0A0G2JLL6 359 aaPredicted RBP14.85□□□□□ -0.03
TMEM47-201ENST00000275954 UBA6A0AVT1 1052 aaPredicted RBP14.85□□□□□ -0.03
TMEM47-201ENST00000275954 KPNA7A9QM74 516 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 JCHAINP01591 159 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 RPL22P35268 128 aaKnown RBP14.85□□□□□ -0.03
TMEM47-201ENST00000275954 ACADSBP45954 432 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 BCAT1P54687 386 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 TRIM32Q13049 653 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 ZC3H12AQ5D1E8 599 aaKnown RBP14.85□□□□□ -0.03
TMEM47-201ENST00000275954 ERMARDQ5T6L9 678 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 MAP3K21Q5TCX8 1036 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 PRRT2Q7Z6L0 340 aaPredicted RBP14.85□□□□□ -0.03
TMEM47-201ENST00000275954 SLFN11Q7Z7L1 901 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 ART4Q93070 314 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 CPXM1Q96SM3 734 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 SH3GL2Q99962 352 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 NUF2Q9BZD4 464 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 SP110Q9HB58 689 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 KIAA1257Q9ULG3 409 aa14.85□□□□□ -0.03
TMEM47-201ENST00000275954 TPH1P17752 444 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 STX1BP61266 288 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 FAAP100Q0VG06 881 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 MFSD10Q14728 455 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 DCAF4L1Q3SXM0 396 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 KBTBD12Q3ZCT8 623 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 RABGAP1LQ5R372 815 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 TTC39BQ5VTQ0 682 aaPredicted RBP14.84□□□□□ -0.03
TMEM47-201ENST00000275954 DCAF12L1Q5VU92 463 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 KCNT2Q6UVM3 1135 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 GSDMBQ8TAX9 411 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 FAM136AQ96C01 138 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 NT5C1B-RDH14C9J2C7 533 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 ARIH2O95376 493 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 POLBP06746 335 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 SP100P23497 879 aaPredicted RBP14.84□□□□□ -0.03
TMEM47-201ENST00000275954 ELF1P32519 619 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 RPA3P35244 121 aaPredicted RBP14.84□□□□□ -0.03
TMEM47-201ENST00000275954 INHBEP58166 350 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 COG7P83436 770 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 RGS9BPQ6ZS82 235 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 DEFB106AQ8N104 65 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 TASP1Q9H6P5 420 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 WDCPQ9H6R7 721 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 KRT82Q9NSB4 513 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 ARHGEF37A1IGU5 675 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 SIGLEC16A6NMB1 481 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 GOLGA8TH3BQL2 631 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 AVILO75366 819 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 MYL2P10916 166 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 GLRBP48167 497 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 TKTL1P51854 596 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 CDC42EP1Q00587 391 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 CUL3Q13618 768 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 PHF13Q86YI8 300 aaPredicted RBP14.84□□□□□ -0.03
TMEM47-201ENST00000275954 MIB1Q86YT6 1006 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 TFAP2BQ92481 460 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 TMEM39AQ9NV64 488 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 TOGARAM1Q9Y4F4 1720 aa14.84□□□□□ -0.03
TMEM47-201ENST00000275954 ETFBP38117 255 aa14.83□□□□□ -0.03
TMEM47-201ENST00000275954 RTP1P59025 263 aa14.83□□□□□ -0.03
TMEM47-201ENST00000275954 NSUN2Q08J23 767 aaKnown RBP eCLIP14.83□□□□□ -0.03
TMEM47-201ENST00000275954 CST9Q5W186 159 aa14.83□□□□□ -0.03
TMEM47-201ENST00000275954 ZCCHC9Q8N567 271 aaKnown RBP14.83□□□□□ -0.03
TMEM47-201ENST00000275954 SHCBP1Q8NEM2 672 aa14.83□□□□□ -0.03
TMEM47-201ENST00000275954 AKAP11Q9UKA4 1901 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 TMEM191CA6NGB0 347 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 SMIM24O75264 130 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 LUC7L3O95232 432 aaKnown RBP14.83□□□□□ -0.04
TMEM47-201ENST00000275954 CBX6O95503 412 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 NQO1P15559 274 aaKnown RBP14.83□□□□□ -0.04
TMEM47-201ENST00000275954 PCSK1P29120 753 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 ATICP31939 592 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 GJA5P36382 358 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 DPYSL3Q14195 570 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 FASTKD3Q14CZ7 662 aaKnown RBP14.83□□□□□ -0.04
TMEM47-201ENST00000275954 KLC3Q6P597 504 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 PIP4K2CQ8TBX8 421 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 RMDN2Q96LZ7 410 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 BCAP29Q9UHQ4 241 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 MID2Q9UJV3 735 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 GPR25O00155 361 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 TGM2P21980 687 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 PDK2Q15119 407 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 SLC27A1Q6PCB7 646 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 ZCCHC23Q6ZST2 131 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 ATPAF2Q8N5M1 289 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 NPLOC4Q8TAT6 608 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 IFT43Q96FT9 208 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 GPR20Q99678 358 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 C12orf65Q9H3J6 166 aaKnown RBP14.83□□□□□ -0.04
TMEM47-201ENST00000275954 TNFSF13BQ9Y275 285 aa14.83□□□□□ -0.04
TMEM47-201ENST00000275954 TADA2AO75478 443 aa14.82□□□□□ -0.04
TMEM47-201ENST00000275954 NUDT17P0C025 328 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms