RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 NUP85Q9BW27 656 aa18.03■□□□□ 0.48
SKP2-201ENST00000274254 TRPM5Q9NZQ8 1165 aa18.03■□□□□ 0.48
SKP2-201ENST00000274254 UVRAGQ9P2Y5 699 aa18.03■□□□□ 0.48
SKP2-201ENST00000274254 PPP2R2CQ9Y2T4 447 aa18.03■□□□□ 0.48
SKP2-201ENST00000274254 EYSQ5T1H1 3165 aa18.02■□□□□ 0.48
SKP2-201ENST00000274254 A0A0A6YYK5 440 aaPredicted RBP18.02■□□□□ 0.47
SKP2-201ENST00000274254 BTNL10A8MVZ5 291 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 NRG2O14511 850 aaPredicted RBP18.02■□□□□ 0.47
SKP2-201ENST00000274254 MOSPD3O75425 235 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 MYL4P12829 197 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 RFC1P35251 1148 aaPredicted RBP18.02■□□□□ 0.47
SKP2-201ENST00000274254 RPL7AP62424 266 aaKnown RBP18.02■□□□□ 0.47
SKP2-201ENST00000274254 NTHL1P78549 312 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 CCDC85BQ15834 202 aaPredicted RBP18.02■□□□□ 0.47
SKP2-201ENST00000274254 SLC5A9Q2M3M2 681 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 TRNP1Q6NT89 227 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 PDZD4Q76G19 769 aaPredicted RBP18.02■□□□□ 0.47
SKP2-201ENST00000274254 RHOT2Q8IXI1 618 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 ZNF276Q8N554 614 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 JOSD2Q8TAC2 188 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 SLC35G2Q8TBE7 412 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 GOLGA1Q92805 767 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 MCEEQ96PE7 176 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 APOL5Q9BWW9 433 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 ABCC13Q9NSE7 274 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.02■□□□□ 0.47
SKP2-201ENST00000274254 COG5Q9UP83 839 aa18.02■□□□□ 0.47
SKP2-201ENST00000274254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
SKP2-201ENST00000274254 TMEM191CA6NGB0 347 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 C2CD4BA6NLJ0 364 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 DAB1O75553 588 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 MTA2O94776 668 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 FLT3P36888 993 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 TUBP50607 506 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 RNASE9P60153 205 aaKnown RBP18.01■□□□□ 0.47
SKP2-201ENST00000274254 KIF5AQ12840 1032 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 BTBD8Q5XKL5 378 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 EP400NLQ6ZTU2 488 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 SMRP1Q8NCR6 262 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 SHKBP1Q8TBC3 707 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 TCEAL4Q96EI5 215 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 OSGEPQ9NPF4 335 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 CTTNBP2NLQ9P2B4 639 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 DUSP10Q9Y6W6 482 aa18.01■□□□□ 0.47
SKP2-201ENST00000274254 A0A1W2PRU2 124 aa18■□□□□ 0.47
SKP2-201ENST00000274254 ZNF197O14709 1029 aa18■□□□□ 0.47
SKP2-201ENST00000274254 ARHGAP25P42331 645 aa18■□□□□ 0.47
SKP2-201ENST00000274254 MATKP42679 507 aa18■□□□□ 0.47
SKP2-201ENST00000274254 HADHBP55084 474 aaKnown RBP18■□□□□ 0.47
SKP2-201ENST00000274254 SYPL2Q5VXT5 272 aa18■□□□□ 0.47
SKP2-201ENST00000274254 CES5AQ6NT32 575 aa18■□□□□ 0.47
SKP2-201ENST00000274254 DCUN1D2Q6PH85 259 aa18■□□□□ 0.47
SKP2-201ENST00000274254 DEFB106AQ8N104 65 aa18■□□□□ 0.47
SKP2-201ENST00000274254 EMC1Q8N766 993 aa18■□□□□ 0.47
SKP2-201ENST00000274254 ZNF564Q8TBZ8 553 aaPredicted RBP18■□□□□ 0.47
SKP2-201ENST00000274254 FNIP1Q8TF40 1166 aa18■□□□□ 0.47
SKP2-201ENST00000274254 EDEM1Q92611 657 aa18■□□□□ 0.47
SKP2-201ENST00000274254 TRIM44Q96DX7 344 aaPredicted RBP18■□□□□ 0.47
SKP2-201ENST00000274254 GCNAQ96QF7 691 aa18■□□□□ 0.47
SKP2-201ENST00000274254 DDX23Q9BUQ8 820 aaKnown RBP18■□□□□ 0.47
SKP2-201ENST00000274254 TRIM7Q9C029 511 aa18■□□□□ 0.47
SKP2-201ENST00000274254 ATXN3LQ9H3M9 355 aa18■□□□□ 0.47
SKP2-201ENST00000274254 WDR6Q9NNW5 1121 aaKnown RBP18■□□□□ 0.47
SKP2-201ENST00000274254 TRIM10Q9UDY6 481 aa18■□□□□ 0.47
SKP2-201ENST00000274254 CDH22Q9UJ99 828 aa18■□□□□ 0.47
SKP2-201ENST00000274254 SALL4Q9UJQ4 1053 aa18■□□□□ 0.47
SKP2-201ENST00000274254 NAALADL1Q9UQQ1 740 aa18■□□□□ 0.47
SKP2-201ENST00000274254 TLR5O60602 858 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 ABL1P00519 1130 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 OAS1P00973 400 aaKnown RBP17.99■□□□□ 0.47
SKP2-201ENST00000274254 RALAP11233 206 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 NCAM1P13591 858 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 RARGP13631 454 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 GJA1P17302 382 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 NOS2P35228 1153 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 OGDHQ02218 1023 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 DCAF6Q58WW2 860 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 HECTD3Q5T447 861 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 MSANTD2Q6P1R3 559 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 KLHDC10Q6PID8 442 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 RXFP2Q8WXD0 754 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 MRPS31Q92665 395 aaKnown RBP17.99■□□□□ 0.47
SKP2-201ENST00000274254 NT5C3BQ969T7 300 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 TSGA10Q9BZW7 698 aa17.99■□□□□ 0.47
SKP2-201ENST00000274254 UBE2ZQ9H832 354 aaPredicted RBP17.99■□□□□ 0.47
SKP2-201ENST00000274254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.99■□□□□ 0.47
SKP2-201ENST00000274254 CAPN9O14815 690 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 OLFM2O95897 454 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 PDGFRAP16234 1089 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 ZNF143P52747 638 aaPredicted RBP17.98■□□□□ 0.47
SKP2-201ENST00000274254 CYP4F8P98187 520 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 ZNF252P-AS1Q0IIN9 211 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 CDK5RAP1Q96SZ6 601 aaKnown RBP17.98■□□□□ 0.47
SKP2-201ENST00000274254 NPY6RQ99463 290 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 CCSER2Q9H7U1 834 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 CD207Q9UJ71 328 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 ANAPC7Q9UJX3 599 aa17.98■□□□□ 0.47
SKP2-201ENST00000274254 MRPS23Q9Y3D9 190 aaKnown RBP17.98■□□□□ 0.47
SKP2-201ENST00000274254 CLUHO75153 1309 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms