RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 OTUD7AQ8TE49 926 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 SIPA1Q96FS4 1042 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 VIPAS39Q9H9C1 493 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 SIRT5Q9NXA8 310 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 ERVK-11Q9UQG0 969 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 PCDHB12Q9Y5F1 795 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 PI4KAP2A4QPH2 592 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 WRBO00258 174 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 NTRK1P04629 796 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 NQO1P15559 274 aaKnown RBP9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 HOXC12P31275 282 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 GGCXP38435 758 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 RASSF2P50749 326 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 NNTQ13423 1086 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 SEL1L2Q5TEA6 688 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 PI4KAP1Q8N8J0 262 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 C11orf65Q8NCR3 313 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 FNDC8Q8TC99 324 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 ERLEC1Q96DZ1 483 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 MTERF3Q96E29 417 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 SYT15Q9BQS2 421 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 CINPQ9BW66 212 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 SPATA16Q9BXB7 569 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 DACT1Q9NYF0 836 aa9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 VSX1Q9NZR4 365 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL-201ENST00000273179 CEP170BQ9Y4F5 1589 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 MSH6P52701 1360 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 FAM25AB3EWG3 89 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 FAM25CB3EWG5 89 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 FAM25GB3EWG6 89 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 H3BM21 787 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 KPNA4O00629 521 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PER2O15055 1255 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 USP12O75317 370 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 OAZ2O95190 189 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 GDF11O95390 407 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 CNOT4O95628 575 aaKnown RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PRKCBP05771 671 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 POLGP54098 1239 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 GFPT1Q06210 699 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 NAB1Q13506 487 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 SPARCL1Q14515 664 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ANO6Q4KMQ2 910 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 MPRIPQ6WCQ1 1025 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 OTOP3Q7RTS5 596 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 KCNK18Q7Z418 384 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 TRIM59Q8IWR1 403 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 OR52K1Q8NGK4 314 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 FAM213AQ9BRX8 229 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 DERAQ9Y315 318 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PCDHGA8Q9Y5G5 932 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 DIP2AQ14689 1571 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 CDHR2Q9BYE9 1310 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 APOC1P02654 83 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PF4V1P10720 104 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 LIG4P49917 911 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 SKP1P63208 163 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 XKR9Q5GH70 373 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 STYK1Q6J9G0 422 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 RRAGAQ7L523 313 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 SSX9Q7RTT3 188 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 MICU2Q8IYU8 434 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 NAXEQ8NCW5 288 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 CHAC2Q8WUX2 184 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 TREM1Q9NP99 234 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ACTR3BQ9P1U1 418 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 VAV3Q9UKW4 847 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ITSN1Q15811 1721 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 USP27XA6NNY8 438 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ASNA1O43681 348 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 USP1O94782 785 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 IFI30P13284 250 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 F8A1P23610 371 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 GNA11P29992 359 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 AFMP43652 599 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 UBE2HP62256 183 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ARHGAP4P98171 946 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ZNF362Q5T0B9 420 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PMF1Q6P1K2 205 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ABRAXAS1Q6UWZ7 409 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PRUNE1Q86TP1 453 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PLCZ1Q86YW0 608 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PLD3Q8IV08 490 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 CNTD1Q8N815 330 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 IL17REQ8NFR9 667 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 SYTL5Q8TDW5 730 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 SLC26A7Q8TE54 656 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 DTD1Q8TEA8 209 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PTCD3Q96EY7 689 aaKnown RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 MAGED4Q96JG8 741 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 TRIM54Q9BYV2 358 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 FRMD8P1Q9BZ68 369 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 GGA3Q9NZ52 723 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 GPSM3Q9Y4H4 160 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 PMF1-BGLAPU3KQ54 211 aa9.18□□□□□ -0.94
CTDSPL-201ENST00000273179 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL-201ENST00000273179 LOC100506127A0A0U1RQW1 187 aa9.17□□□□□ -0.94
CTDSPL-201ENST00000273179 DDX39AO00148 427 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms