RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 DEFB128Q7Z7B8 93 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 RFX6Q8HWS3 928 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 HAUS1Q96CS2 278 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 SNRNP25Q9BV90 132 aaKnown RBP21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 DNPEPQ9ULA0 475 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 NRP1O14786 923 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 MDM4O15151 490 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 OAZ2O95190 189 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 HSPA9P38646 679 aaKnown RBP21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 SULT1E1P49888 294 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 DYNLT1P63172 113 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 LMNB2Q03252 620 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 BYSLQ13895 437 aaKnown RBP21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 DPYSL3Q14195 570 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 KRT81Q14533 505 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 PDK2Q15119 407 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 SLC25A52Q3SY17 297 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 ZDHHC24Q6UX98 284 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 MAP7D3Q8IWC1 876 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 SLC2A13Q96QE2 648 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 DMAP1Q9NPF5 467 aaPredicted RBP21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 GPATCH2LQ9NWQ4 482 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 ATP11BQ9Y2G3 1177 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 PTPRDP23468 1912 aa21.45■■□□□ 1.02
LYSMD2-201ENST00000267838 SYN3O14994 580 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 NOS2P35228 1153 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 ATXN1P54253 815 aaKnown RBP21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 PLTPP55058 493 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 DCAF6Q58WW2 860 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 ZC3H12AQ5D1E8 599 aaKnown RBP21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 EMC10Q5UCC4 262 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 LRIG3Q6UXM1 1119 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 KDM7AQ6ZMT4 941 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 C4orf50Q6ZRC1 276 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 TTC13Q8NBP0 860 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 FMO2Q99518 471 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 MRPL9Q9BYD2 267 aaKnown RBP21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 POPDC2Q9HBU9 364 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 TMEM51Q9NW97 253 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 ASIC3Q9UHC3 531 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 ADAM28Q9UKQ2 775 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 TBX21Q9UL17 535 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 NEU2Q9Y3R4 380 aa21.44■■□□□ 1.02
LYSMD2-201ENST00000267838 EBAG9O00559 213 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ALDH2P05091 517 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 BCAR1P56945 870 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 MMRN1Q13201 1228 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ERMARDQ5T6L9 678 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 HFE2Q6ZVN8 426 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 SPATA2LQ8IUW3 424 aaPredicted RBP21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 PPM1EQ8WY54 764 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ARL8AQ96BM9 186 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 LRRC45Q96CN5 670 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 COLEC11Q9BWP8 271 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 MAK16Q9BXY0 300 aaKnown RBP21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 FRMD8P1Q9BZ68 369 aaPredicted RBP21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 STAP1Q9ULZ2 295 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 DRG1Q9Y295 367 aaKnown RBP21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 MICAL3Q7RTP6 2002 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 YJEFN3A6XGL0 299 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 TBKBP1A7MCY6 615 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 E7ENQ6 273 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 TRIM66O15016 1216 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ZBED1O96006 694 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 USP17L7P0C7H9 530 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 VCPP55072 806 aaKnown RBP21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 OTUD4Q01804 1114 aaKnown RBP21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ZNF365Q70YC5 407 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 GSTA5Q7RTV2 222 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 FBXO25Q8TCJ0 367 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 NKD2Q969F2 451 aaPredicted RBP21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 NT5C3BQ969T7 300 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ARMC5Q96C12 935 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 NPY6RQ99463 290 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ZCWPW1Q9H0M4 648 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 PCDH18Q9HCL0 1135 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 PNPLA8Q9NP80 782 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 ZNF148Q9UQR1 794 aa21.43■■□□□ 1.02
LYSMD2-201ENST00000267838 HMGB1P1B2RPK0 211 aaPredicted RBP21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 OR4Q2P0C623 313 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 SLC11A1P49279 550 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 TRIP13Q15645 432 aaPredicted RBP21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 OASLQ15646 514 aaKnown RBP21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 CA9Q16790 459 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 OTUD1Q5VV17 481 aaPredicted RBP21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 VSIG1Q86XK7 387 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 DCP1BQ8IZD4 617 aaKnown RBP21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 SLC35B2Q8TB61 432 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 ACTL9Q8TC94 416 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 ART4Q93070 314 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 FAM129AQ9BZQ8 928 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 TMEM39AQ9NV64 488 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 MARCH5Q9NX47 278 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 WHRNQ9P202 907 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 HCSTQ9UBK5 93 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 FNDC1Q4ZHG4 1894 aaPredicted RBP21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 PATJQ8NI35 1801 aa21.42■■□□□ 1.02
LYSMD2-201ENST00000267838 VWA8A3KMH1 1905 aa21.41■■□□□ 1.02
LYSMD2-201ENST00000267838 APOC4-APOC2K7ER74 178 aa21.41■■□□□ 1.02
LYSMD2-201ENST00000267838 KRT14P02533 472 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms