RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 LRRC37BQ96QE4 947 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 SYT11Q9BT88 431 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 DENND2DQ9H6A0 471 aaPredicted RBP13.18□□□□□ -0.3
PRPF6-201ENST00000266079 PLEKHA5Q9HAU0 1116 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
PRPF6-201ENST00000266079 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 STARD13Q9Y3M8 1113 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 PCDHB4Q9Y5E5 795 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 ANKRD62A6NC57 917 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 HCRTO43612 131 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 THP07101 528 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 T-ENOLP0DO92 83 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 VHLP40337 213 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 RASSF2P50749 326 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 CLCNKBP51801 687 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 CFAP61Q8NHU2 1237 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 RGS18Q9NS28 235 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 TIMM13Q9Y5L4 95 aaPredicted RBP13.18□□□□□ -0.3
PRPF6-201ENST00000266079 SPTLC1O15269 473 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 B4GALT3O60512 393 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 ENTPD5O75356 428 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 MARCKSL1P49006 195 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
PRPF6-201ENST00000266079 RBP5P82980 135 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
PRPF6-201ENST00000266079 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 ZSWIM1Q9BR11 485 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 NMRK1Q9NWW6 199 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 LRFN2Q9ULH4 789 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
PRPF6-201ENST00000266079 A0A1B0GVG6 124 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.17□□□□□ -0.3
PRPF6-201ENST00000266079 SIGLEC16A6NMB1 481 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 TRAFD1O14545 582 aaPredicted RBP13.17□□□□□ -0.3
PRPF6-201ENST00000266079 TCEA3O75764 348 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 DCTN3O75935 186 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 AP3M2P53677 418 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 IL9RQ01113 521 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 C9orf57Q5W0N0 161 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 ABI1Q8IZP0 508 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 CYP4X1Q8N118 509 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 PHC3Q8NDX5 983 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 LRRC8CQ8TDW0 803 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
PRPF6-201ENST00000266079 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 PRG3Q9Y2Y8 225 aaPredicted RBP13.17□□□□□ -0.3
PRPF6-201ENST00000266079 TTC4O95801 387 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 TNFAIP3P21580 790 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 KCNJ1P48048 391 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 ZBTB6Q15916 424 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 C11orf63Q6NUN7 778 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 GLB1LQ6UWU2 654 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 SEZ6LQ9BYH1 1024 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 NIF3L1Q9GZT8 377 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 SDCBP2Q9H190 292 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 PCMTD2Q9NV79 361 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 TAS2R14Q9NYV8 317 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 LGALS13Q9UHV8 139 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
PRPF6-201ENST00000266079 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 ZNF623O75123 536 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PYGLP06737 847 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 RCN2Q14257 317 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 FOXB2Q5VYV0 432 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 ZNF598Q86UK7 904 aaKnown RBP13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PALB2Q86YC2 1186 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 C3orf58Q8NDZ4 430 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PGBD4Q96DM1 585 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 RBM41Q96IZ5 413 aaKnown RBP13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PPP1R10Q96QC0 940 aaKnown RBP13.16□□□□□ -0.3
PRPF6-201ENST00000266079 CISHQ9NSE2 258 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 WHRNQ9P202 907 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PRKAG2Q9UGJ0 569 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 TCRBV7S2A1N4TA0A589 114 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 B3GAT3O94766 335 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 SKIP12755 728 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 CHKAP35790 457 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 ASPAP45381 313 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 BCAR1P56945 870 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 KYNUQ16719 465 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 ZNF449Q6P9G9 518 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 RHBDF2Q6PJF5 856 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 PASD1Q8IV76 773 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 SRRM1Q8IYB3 904 aaKnown RBP13.16□□□□□ -0.3
PRPF6-201ENST00000266079 LPIN3Q9BQK8 851 aa13.16□□□□□ -0.3
PRPF6-201ENST00000266079 TLE6Q9H808 572 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms