RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 EFHD1Q9BUP0 239 aa16.84■□□□□ 0.29
GPC1-201ENST00000264039 PPCSQ9HAB8 311 aa16.84■□□□□ 0.29
GPC1-201ENST00000264039 THAP1Q9NVV9 213 aa16.84■□□□□ 0.29
GPC1-201ENST00000264039 SIGLEC16A6NMB1 481 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 NDUFB10O96000 172 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 SERPINA6P08185 405 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 SMARCA1P28370 1054 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 MAP3K10Q02779 954 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 PRKD1Q15139 912 aaPredicted RBP16.83■□□□□ 0.29
GPC1-201ENST00000264039 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.29
GPC1-201ENST00000264039 CTC1Q2NKJ3 1217 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.29
GPC1-201ENST00000264039 ZBTB49Q6ZSB9 765 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 DEPTORQ8TB45 409 aa16.83■□□□□ 0.29
GPC1-201ENST00000264039 TMEM94Q12767 1356 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 CLUHO75153 1309 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 F7P08709 466 aaPredicted RBP16.83■□□□□ 0.28
GPC1-201ENST00000264039 PCSK6P29122 969 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 GLRBP48167 497 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 TMIGD2Q96BF3 282 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 MAML3Q96JK9 1138 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 WDR55Q9H6Y2 383 aaPredicted RBP16.83■□□□□ 0.28
GPC1-201ENST00000264039 GTSE1Q9NYZ3 720 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 HBS1LQ9Y450 684 aaKnown RBP16.83■□□□□ 0.28
GPC1-201ENST00000264039 SPTLC1O15269 473 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 PRPSAP2O60256 369 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 SIN3BO75182 1162 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 PENKP01210 267 aaPredicted RBP16.83■□□□□ 0.28
GPC1-201ENST00000264039 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.28
GPC1-201ENST00000264039 HYIQ5T013 277 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 RNASEH2BQ5TBB1 312 aaKnown RBP16.83■□□□□ 0.28
GPC1-201ENST00000264039 ADGRD1Q6QNK2 874 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 ANKS1BQ7Z6G8 1248 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 CEP41Q9BYV8 373 aa16.83■□□□□ 0.28
GPC1-201ENST00000264039 BARX2Q9UMQ3 279 aaPredicted RBP16.83■□□□□ 0.28
GPC1-201ENST00000264039 TBX3O15119 743 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 TMEM63AO94886 807 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 HSPA2P54652 639 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 HEATR4Q86WZ0 1026 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 ADNPQ9H2P0 1102 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 GID8Q9NWU2 228 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 E2F6O75461 281 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 QARSP47897 775 aaKnown RBP16.82■□□□□ 0.28
GPC1-201ENST00000264039 RAP1GDS1P52306 607 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 NUP107P57740 925 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 NETO2Q8NC67 525 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 CATSPER1Q8NEC5 780 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 USP29Q9HBJ7 922 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 PLGRKTQ9HBL7 147 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 PCDHGA4Q9Y5G9 962 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 RALBP11234 206 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 EIF4BP23588 611 aaKnown RBP16.82■□□□□ 0.28
GPC1-201ENST00000264039 IL1RL1Q01638 556 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 AAGABQ6PD74 315 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 KATNAL2Q8IYT4 538 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 TMCO5AQ8N6Q1 288 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 TTLL6Q8N841 843 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 CIB1Q99828 191 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 MRPS26Q9BYN8 205 aaKnown RBP16.82■□□□□ 0.28
GPC1-201ENST00000264039 BRD8Q9H0E9 1235 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 ING2Q9H160 280 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 EURLQ9NYK6 297 aa16.82■□□□□ 0.28
GPC1-201ENST00000264039 SPEF2Q9C093 1822 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 STX16-NPEPL1H3BU86 382 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 COQ9O75208 318 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 ZBTB11O95625 1053 aaPredicted RBP16.81■□□□□ 0.28
GPC1-201ENST00000264039 GCAP28676 217 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 OGFOD2Q6N063 350 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 CCDC80Q76M96 950 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 MYRFQ9Y2G1 1151 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 NFAT5O94916 1531 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 AGRPO00253 132 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 EDIL3O43854 480 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 KRT7P08729 469 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 GMPRP36959 345 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 KPNA1P52294 538 aaPredicted RBP16.81■□□□□ 0.28
GPC1-201ENST00000264039 MMRN1Q13201 1228 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 BMT2Q1RMZ1 405 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 CMPK2Q5EBM0 449 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 FAM102AQ5T9C2 384 aaPredicted RBP16.81■□□□□ 0.28
GPC1-201ENST00000264039 GPD1LQ8N335 351 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 FAM47BQ8NA70 645 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 MSTO1Q9BUK6 570 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 UPF3AQ9H1J1 476 aaKnown RBP16.81■□□□□ 0.28
GPC1-201ENST00000264039 NRDE2Q9H7Z3 1164 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 TLE6Q9H808 572 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.81■□□□□ 0.28
GPC1-201ENST00000264039 SLC17A6Q9P2U8 582 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 DAPK2Q9UIK4 370 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 ITM2AO43736 263 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 COX4I1P13073 169 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 EPHA3P29320 983 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 EGFLAMQ63HQ2 1017 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 KYQ8NBH2 561 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 GPAMQ9HCL2 828 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms