RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 OSBPP22059 807 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 CDH5P33151 784 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 SPP2Q13103 211 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 TFDP2Q14188 446 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 ACAP1Q15027 740 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 FAM47CQ5HY64 1035 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 RARS2Q5T160 578 aaKnown RBP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 BORAQ6PGQ7 559 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 KBTBD6Q86V97 674 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 SPATA18Q8TC71 538 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 C10orf88Q9H8K7 445 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 ARHGAP26Q9UNA1 814 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 STYXL1Q9Y6J8 313 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 SIPA1L1O43166 1804 aa12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 SF3B1O75533 1304 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHMP2B-201ENST00000263780 TTC36A6NLP5 189 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 TOM1L1O75674 476 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 DGAT1O75907 488 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 KRT3P12035 628 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 CPA3P15088 417 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 GRK2P25098 689 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 GABRB2P47870 512 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 JAG1P78504 1218 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 SULT2A1Q06520 285 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 DCTN2Q13561 401 aaKnown RBP12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 C4orf22Q6V702 233 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 RNF111Q6ZNA4 994 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 TMC7Q7Z402 723 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 ACMSDQ8TDX5 336 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 ATP2A3Q93084 1043 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 SERPINI1Q99574 410 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 APOL6Q9BWW8 343 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 ZNF696Q9H7X3 374 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 HSFX1Q9UBD0 423 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 SERPINA10Q9UK55 444 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 PADI4Q9UM07 663 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 G3BP2Q9UN86 482 aaKnown RBP12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 LZTS1Q9Y250 596 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 NUB1Q9Y5A7 615 aa12.83□□□□□ -0.35
CHMP2B-201ENST00000263780 SIN3BO75182 1162 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 LRCH4O75427 683 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 OR6B1O95007 311 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 PGM3O95394 542 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 APOEP02649 317 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 TFAP2AP05549 437 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 SPATA31D3P0C874 917 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 L1CAMP32004 1257 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 INHBCP55103 352 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 NCOA4Q13772 614 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 CNGA3Q16281 694 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 ZFP1Q6P2D0 407 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 KLHDC10Q6PID8 442 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 SPATA31D4Q6ZUB0 917 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 PQLC1Q8N2U9 271 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 LRRC43Q8N309 656 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 CMASQ8NFW8 434 aaPredicted RBP12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 ATP6V0A1Q93050 837 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 EBF4Q9BQW3 602 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 KLC2Q9H0B6 622 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 DNAJC16Q9Y2G8 782 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 INPP5FQ9Y2H2 1132 aa12.83□□□□□ -0.36
CHMP2B-201ENST00000263780 COQ9O75208 318 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 C1QAP02745 245 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 ICAM1P05362 532 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 PMLP29590 882 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 SERPINB8P50452 374 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 ADARP55265 1226 aaKnown RBP12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 HDAC4P56524 1084 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 YWHAEP62258 255 aaKnown RBP12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 TBL3Q12788 808 aaKnown RBP12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 MTM1Q13496 603 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 TUBB3Q13509 450 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 KRT81Q14533 505 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 FASTKD1Q53R41 847 aaKnown RBP12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 RALGPS1Q5JS13 557 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 UBR7Q8N806 425 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 LRGUKQ96M69 825 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 RAB6BQ9NRW1 208 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 CYB561D2O14569 222 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 LGR5O75473 907 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 SLC1A6P48664 564 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 HIRAP54198 1017 aaPredicted RBP12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 NR1H2P55055 460 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 NLRP11P59045 1033 aaKnown RBP12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 GHRHRQ02643 423 aa12.82□□□□□ -0.36
CHMP2B-201ENST00000263780 NOMO1Q15155 1222 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms