RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NOX5Q96PH1 765 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 C11orf70Q9BRQ4 267 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 PLA2G2FQ9BZM2 168 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 ABHD10Q9NUJ1 306 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 TPM1P09493 284 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 RARGP13631 454 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 ZXDBP98169 803 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 CLEC16AQ2KHT3 1053 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 HECTD3Q5T447 861 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 GJD3Q8N144 294 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 SPC24Q8NBT2 197 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 IPO4Q8TEX9 1081 aaKnown RBP19.23■□□□□ 0.67
SDF4-201ENST00000263741 USP13Q92995 863 aaPredicted RBP19.23■□□□□ 0.67
SDF4-201ENST00000263741 KCNK12Q9HB15 430 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.23■□□□□ 0.673e-6■■■■□ 23.1
SDF4-201ENST00000263741 ARHGAP20Q9P2F6 1191 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 MYOFQ9NZM1 2061 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 GRAP2O75791 330 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 UNGP13051 313 aaPredicted RBP19.23■□□□□ 0.67
SDF4-201ENST00000263741 TNFAIP3P21580 790 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 ACADSBP45954 432 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 GRM2Q14416 872 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 OR6B2Q6IFH4 312 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 WDR59Q6PJI9 974 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 ERICH1Q86X53 443 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 SYN2Q92777 582 aaPredicted RBP19.23■□□□□ 0.67
SDF4-201ENST00000263741 FAM149B1Q96BN6 582 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 LRRC3BQ96PB8 259 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 DNAJC7Q99615 494 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 NACA2Q9H009 215 aa19.23■□□□□ 0.67
SDF4-201ENST00000263741 NUCKS1Q9H1E3 243 aaKnown RBP19.23■□□□□ 0.67
SDF4-201ENST00000263741 ZFP37Q9Y6Q3 630 aaPredicted RBP19.23■□□□□ 0.67
SDF4-201ENST00000263741 DDX3XO00571 662 aaKnown RBP eCLIP19.22■□□□□ 0.672e-11■■■■■ 29.8
SDF4-201ENST00000263741 MBL2P11226 248 aaPredicted RBP19.22■□□□□ 0.67
SDF4-201ENST00000263741 DDX6P26196 483 aaKnown RBP eCLIP19.22■□□□□ 0.67
SDF4-201ENST00000263741 PPP3CCP48454 512 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 SNX30Q5VWJ9 437 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 BSPRYQ5W0U4 402 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 TRIM72Q6ZMU5 477 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 RNF135Q8IUD6 432 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 FMNL3Q8IVF7 1028 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 DRC7Q8IY82 874 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 PLCD3Q8N3E9 789 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 KIAA1524Q8TCG1 905 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 COL4A3Q01955 1670 aa19.22■□□□□ 0.67
SDF4-201ENST00000263741 ANHXE9PGG2 379 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 OLFM2O95897 454 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 SERPING1P05155 500 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 CENPCQ03188 943 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 C10orf120Q5SQS8 335 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 VITQ6UXI7 678 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 HOMEZQ8IX15 550 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 TC2NQ8N9U0 490 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 OR8K1Q8NGG5 319 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 ZFP14Q9HCL3 533 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 CYLDQ9NQC7 956 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 CPQQ9Y646 472 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 AKR1B15C9JRZ8 316 aaPredicted RBP19.21■□□□□ 0.67
SDF4-201ENST00000263741 GOLGA8SH3BPF8 625 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 FBXO21O94952 628 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 LTFP02788 710 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 IRF1P10914 325 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 NSFP46459 744 aaKnown RBP19.21■□□□□ 0.67
SDF4-201ENST00000263741 BTBD8Q5XKL5 378 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 OLFML1Q6UWY5 402 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 RSRC2Q7L4I2 434 aaKnown RBP19.21■□□□□ 0.67
SDF4-201ENST00000263741 XYLT1Q86Y38 959 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 MIB1Q86YT6 1006 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.21■□□□□ 0.67
SDF4-201ENST00000263741 MUTYHQ9UIF7 546 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 RASAL2Q9UJF2 1139 aa19.21■□□□□ 0.67
SDF4-201ENST00000263741 HEPACAM2A8MVW5 462 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 GJB6O95452 261 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 EFEMP1Q12805 493 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 MTSS1LQ765P7 747 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 WBP2Q969T9 261 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 C18orf8Q96DM3 657 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 ZFRQ96KR1 1074 aaKnown RBP19.2■□□□□ 0.66
SDF4-201ENST00000263741 CHP1Q99653 195 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 GKN1Q9NS71 199 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 TDP1Q9NUW8 608 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 COL4A2P08572 1712 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 NARSO43776 548 aaKnown RBP19.2■□□□□ 0.66
SDF4-201ENST00000263741 FYNP06241 537 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 MMP8P22894 467 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 HNRNPH3P31942 346 aaKnown RBP19.2■□□□□ 0.66
SDF4-201ENST00000263741 PSEN1P49768 467 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 TUBP50607 506 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 CNGA4Q8IV77 575 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 SCML4Q8N228 414 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 ARHGAP18Q8N392 663 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 IRGQQ8WZA9 623 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 KHSRPQ92945 711 aaKnown RBP eCLIP19.2■□□□□ 0.66
SDF4-201ENST00000263741 ZFYVE19Q96K21 471 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 CLIC5Q9NZA1 410 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 ADAMTS1Q9UHI8 967 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 NAALADL1Q9UQQ1 740 aa19.2■□□□□ 0.66
SDF4-201ENST00000263741 MSI1O43347 362 aaKnown RBP19.19■□□□□ 0.66
SDF4-201ENST00000263741 RALAP11233 206 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 EIF4A3P38919 411 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms