RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PEX26Q7Z412 305 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 NT5DC3Q86UY8 548 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 FBXO32Q969P5 355 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 TLR10Q9BXR5 811 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 ZNF576Q9H609 170 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 MAN1C1Q9NR34 630 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 COX16Q9P0S2 106 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 IP6K2Q9UHH9 426 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 SCML2Q9UQR0 700 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 PRRC2BQ5JSZ5 2229 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 CCL16O15467 120 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SPOPO43791 374 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 HSF2BPO75031 334 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SRGAP2O75044 1071 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 DAB1O75553 588 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 RTN3O95197 1032 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 NCAM1P13591 858 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 CXCR5P32302 372 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 NRIP1P48552 1158 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 ZNF143P52747 638 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 EMP3P54852 163 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 YWHAGP61981 247 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 PLD1Q13393 1074 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 ATP13A4Q4VNC1 1196 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 OTUD1Q5VV17 481 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 TXNRD3NBQ6F5E7 133 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 CC2D1AQ6P1N0 951 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 DNAJB7Q7Z6W7 309 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SCML4Q8N228 414 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 KRT35Q92764 455 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 ACSF2Q96CM8 615 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SLC2A13Q96QE2 648 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 TBCBQ99426 244 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 NAPGQ99747 312 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 DDX23Q9BUQ8 820 aaKnown RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 FBXO44Q9H4M3 255 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 IGFLR1Q9H665 355 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 TLE6Q9H808 572 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 POPDC2Q9HBU9 364 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 ZNF334Q9HCZ1 680 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 PCSK1NQ9UHG2 260 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 AMFRQ9UKV5 643 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 ANAPC1Q9H1A4 1944 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 FAM92AA1XBS5 289 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 CTAGE9A4FU28 777 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SOX1O00570 391 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 NRG2O14511 850 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 CAPN9O14815 690 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 MDM4O15151 490 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 TBX18O95935 607 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SDC4P31431 198 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SCNN1AP37088 669 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 MATKP42679 507 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SULT1E1P49888 294 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 EPHB3P54753 998 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 PIGHQ14442 188 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 TAF12Q16514 161 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 PPM1LQ5SGD2 360 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 BTBD8Q5XKL5 378 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 PDE12Q6L8Q7 609 aaKnown RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 MON1AQ86VX9 555 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SYCE1Q8N0S2 351 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 C12orf76Q8N812 135 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 VN1R2Q8NFZ6 395 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 FAM172AQ8WUF8 416 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 IRGQQ8WZA9 623 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 CD101Q93033 1021 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 CNPY3Q9BT09 278 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 TTLL2Q9BWV7 592 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 MAGEB5Q9BZ81 275 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 TTYH1Q9H313 450 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 PRDM12Q9H4Q4 367 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 ZWILCHQ9H900 591 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 KLHL11Q9NVR0 708 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 ASNSD1Q9NWL6 643 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 HCFC1R1Q9NWW0 138 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 HSFX1Q9UBD0 423 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 SFMBT1Q9UHJ3 866 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 JRKLQ9Y4A0 524 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 HCFC2Q9Y5Z7 792 aa10.18□□□□□ -0.78
SNRNP40-201ENST00000263694 M0QYT0 321 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 DPYSL4O14531 572 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 ZNF185O15231 689 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 DDX3YO15523 660 aaKnown RBP10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 SART1O43290 800 aaKnown RBP10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 LRCH4O75427 683 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 LRG1P02750 347 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 GLI1P08151 1106 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 CSH1P0DML2 217 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 CSH2P0DML3 217 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 PYGBP11216 843 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 RARGP13631 454 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 IL1R2P27930 398 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 MIPP30301 263 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 NOS2P35228 1153 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 HDAC4P56524 1084 aa10.17□□□□□ -0.78
SNRNP40-201ENST00000263694 NME3Q13232 169 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms