RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 BEND5Q7L4P6 421 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 STRADAQ7RTN6 431 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 BNIPLQ7Z465 357 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 SCD5Q86SK9 330 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 LRRN4CLQ8ND94 238 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 ACTRT1Q8TDG2 376 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 KLHL5Q96PQ7 755 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 NCAPGQ9BPX3 1015 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 TLR9Q9NR96 1032 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 CALCOCO1Q9P1Z2 691 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 PCSK1NQ9UHG2 260 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 MAFFQ9ULX9 164 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 SLC38A8A6NNN8 435 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 TRUB2O95900 331 aaKnown RBP23.69■■□□□ 1.38
UFD1-201ENST00000263202 YWHAQP27348 245 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 PAFAH1B1P43034 410 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 PGFP49763 221 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 ERVK-21P61565 698 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 SMC1AQ14683 1233 aaKnown RBP23.69■■□□□ 1.38
UFD1-201ENST00000263202 PLPP4Q5VZY2 271 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 CYP4V2Q6ZWL3 525 aaPredicted RBP23.69■■□□□ 1.38
UFD1-201ENST00000263202 TCEAL8Q8IYN2 117 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 MRPL43Q8N983 215 aaKnown RBP23.69■■□□□ 1.38
UFD1-201ENST00000263202 EDEM1Q92611 657 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 PEBP4Q96S96 227 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 TRIM62Q9BVG3 475 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 ZWILCHQ9H900 591 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 YIPF1Q9Y548 306 aa23.69■■□□□ 1.38
UFD1-201ENST00000263202 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.68■■□□□ 1.38
UFD1-201ENST00000263202 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.68■■□□□ 1.38
UFD1-201ENST00000263202 GRM6O15303 877 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 ENDOD1O94919 500 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 KRT7P08729 469 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 ZNF572Q7Z3I7 529 aaPredicted RBP23.68■■□□□ 1.38
UFD1-201ENST00000263202 MON1AQ86VX9 555 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 PBX4Q9BYU1 374 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 NMUR1Q9HB89 426 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 ABCC13Q9NSE7 274 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 TTC7AQ9ULT0 858 aaPredicted RBP23.68■■□□□ 1.38
UFD1-201ENST00000263202 MTCL1Q9Y4B5 1905 aaKnown RBP23.68■■□□□ 1.38
UFD1-201ENST00000263202 C2orf71A6NGG8 1288 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 HIDE1A8MVS5 230 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 ELF1P32519 619 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 ATXN1P54253 815 aaKnown RBP23.68■■□□□ 1.38
UFD1-201ENST00000263202 CAMK1Q14012 370 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 SEL1L2Q5TEA6 688 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 MNS1Q8NEH6 495 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 EXD1Q8NHP7 514 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 TTLL2Q9BWV7 592 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 EMILIN2Q9BXX0 1053 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 DDX56Q9NY93 547 aaKnown RBP23.68■■□□□ 1.38
UFD1-201ENST00000263202 RRN3Q9NYV6 651 aa23.68■■□□□ 1.38
UFD1-201ENST00000263202 CEP290O15078 2479 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 A0A1W2PQH9 124 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 M0QYT0 321 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 PRRG1O14668 218 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 FSCN2O14926 492 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 TGM5O43548 720 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 CSPG5O95196 566 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 ADH1AP07327 375 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 SMTNL2Q2TAL5 461 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 BTBD8Q5XKL5 378 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 SCYL2Q6P3W7 929 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 LILRA6Q6PI73 481 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 FBXO32Q969P5 355 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 KLHL11Q9NVR0 708 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 GMIPQ9P107 970 aa23.67■■□□□ 1.38
UFD1-201ENST00000263202 PGRMC1O00264 195 aaKnown RBP23.66■■□□□ 1.38
UFD1-201ENST00000263202 PRPSAP2O60256 369 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 ZRANB2O95218 330 aaKnown RBP eCLIP23.66■■□□□ 1.383e-6■■□□□ 14.3
UFD1-201ENST00000263202 ALDH1A3P47895 512 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 TAF10Q12962 218 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 KCNT1Q5JUK3 1230 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 ARHGAP18Q8N392 663 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 SLC7A14Q8TBB6 771 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 ACSF2Q96CM8 615 aaPredicted RBP23.66■■□□□ 1.38
UFD1-201ENST00000263202 OSER1Q9NX31 292 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 ATG2AQ2TAZ0 1938 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 CTAGE15A4D2H0 777 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 KRT1P04264 644 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 SPATA31D3P0C874 917 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 CTAGE8P0CG41 777 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 RARAP10276 462 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 SPATA31D4Q6ZUB0 917 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 CTAGE6Q86UF2 777 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 CTAGE4Q8IX94 777 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 RCOR2Q8IZ40 523 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 PGAP3Q96FM1 320 aaPredicted RBP23.66■■□□□ 1.38
UFD1-201ENST00000263202 INSL5Q9Y5Q6 135 aa23.66■■□□□ 1.38
UFD1-201ENST00000263202 H3BNC9 293 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 FGGP02679 453 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 KLRC2P26717 231 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 RDXP35241 583 aaKnown RBP23.65■■□□□ 1.38
UFD1-201ENST00000263202 IRS1P35568 1242 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 DEUP1Q05D60 604 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 ZFYVE27Q5T4F4 411 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 MYRIPQ8NFW9 859 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 ADAM32Q8TC27 787 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 RAPGEF5Q92565 580 aa23.65■■□□□ 1.38
UFD1-201ENST00000263202 RNF25Q96BH1 459 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms