RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 AAASQ9NRG9 546 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 NDST1P52848 882 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 NKX3-2P78367 333 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 KIZQ2M2Z5 673 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 NAPEPLDQ6IQ20 393 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 DPY19L2P1Q6NXN4 242 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 CRELD2Q6UXH1 353 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 ACTL9Q8TC94 416 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 ALG3Q92685 438 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 RNF25Q96BH1 459 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 VPS39Q96JC1 886 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SERPINB11Q96P15 392 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 AFF4Q9UHB7 1163 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 MAFFQ9ULX9 164 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SYN3O14994 580 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 FGF10O15520 208 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 ASMTLO95671 621 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 GABRB2P47870 512 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 TM4SF4P48230 202 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 OXCT1P55809 520 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SLC9A5Q14940 896 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 FBXO25Q8TCJ0 367 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 CPA5Q8WXQ8 436 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 WNT8BQ93098 351 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 TNS1Q9HBL0 1735 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 BRD2P25440 801 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 NAA20P61599 178 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SP2Q02086 613 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 TMC3Q7Z5M5 1100 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 RASAL3Q86YV0 1011 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 DEPDC1BQ8WUY9 529 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 RSRC1Q96IZ7 334 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 PRKD2Q9BZL6 878 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 ELAC1Q9H777 363 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 PI4K2BG5E9Z4 385 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ADCY6O43306 1168 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ZNF394Q53GI3 561 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 BTBD8Q5XKL5 378 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TTC23LQ6PF05 361 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ACBD6Q9BR61 282 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 POPDC2Q9HBU9 364 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TEKT2Q9UIF3 430 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 DLEC1Q9Y238 1755 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 CREB3O43889 395 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ANXA9O76027 345 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 PLA2G4AP47712 749 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 EIF3EP60228 445 aaKnown RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 WASHC5Q12768 1159 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 SPARCL1Q14515 664 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TAS1R3Q7RTX0 852 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 MFN1Q8IWA4 741 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ZSWIM2Q8NEG5 633 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 CMASQ8NFW8 434 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ART4Q93070 314 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ASIC4Q96FT7 647 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 GNEQ9Y223 722 aaKnown RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TLL2Q9Y6L7 1015 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 RTN3O95197 1032 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 BAG2O95816 211 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 PCSK2P16519 638 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 MATKP42679 507 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 DMTNQ08495 405 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 RAB42Q8N4Z0 105 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 DDX1Q92499 740 aaKnown RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 COPS5Q92905 334 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 USP13Q92995 863 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 SLITRK1Q96PX8 696 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 PI4K2AQ9BTU6 479 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 XYLT2Q9H1B5 865 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 SARS2Q9NP81 518 aaKnown RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 PSMC3IPQ9P2W1 217 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 PTPRJQ12913 1337 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 SSC5DA1L4H1 1573 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TRDMT1O14717 391 aaKnown RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TAL1P17542 331 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 CHRNB2P17787 502 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 GPD2P43304 727 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TUFMP49411 452 aaKnown RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 GOLGA7BQ2TAP0 167 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 MAP3K21Q5TCX8 1036 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 SPOPLQ6IQ16 392 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TIGD7Q6NT04 549 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-201ENST00000262539 SLC24A5Q71RS6 500 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TDRPQ86YL5 185 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 CALML6Q8TD86 181 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 VPS9D1Q9Y2B5 631 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TMEM150BA6NC51 233 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 GPR25O00155 361 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 NFICP08651 508 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 DEUP1Q05D60 604 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 NUGGCQ68CJ6 796 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 CCDC197Q8NCU1 140 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 RXFP2Q8WXD0 754 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 SH3GL2Q99962 352 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 ZNF212Q9UDV6 495 aa8.53□□□□□ -1.04
PTPN3-201ENST00000262539 TLK1Q9UKI8 766 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms