RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 A0A0A6YYK5 440 aaPredicted RBP28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 TMEM191CA6NGB0 347 aa28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 BTNL10A8MVZ5 291 aa28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 BUB1BO60566 1050 aaPredicted RBP28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 TFE3P19532 575 aaPredicted RBP28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 YWHAQP27348 245 aa28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 SNX16P57768 344 aa28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 DNAJB7Q7Z6W7 309 aaPredicted RBP28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 C12orf76Q8N812 135 aaPredicted RBP28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 FBXO32Q969P5 355 aa28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 CXorf56Q9H5V9 222 aa28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 ZNF334Q9HCZ1 680 aaPredicted RBP28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 UVRAGQ9P2Y5 699 aa28.78■■■□□ 2.2
SMARCD3-201ENST00000262188 DOCK6Q96HP0 2047 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 A0A1W2PQH9 124 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 LINC01565O15544 149 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 LRG1P02750 347 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 FYNP06241 537 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 EPHB3P54753 998 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 PITX1P78337 314 aaPredicted RBP28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 MESDQ14696 234 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 PPM1LQ5SGD2 360 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 CCDC149Q6ZUS6 474 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 SLC26A9Q7LBE3 791 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 TACO1Q9BSH4 297 aaKnown RBP28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 ADAM33Q9BZ11 813 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 MRPL47Q9HD33 250 aaKnown RBP28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 HCFC1R1Q9NWW0 138 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 IL37Q9NZH6 218 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 NAALADL1Q9UQQ1 740 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 GRID2IPA4D2P6 1211 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 FBXO21O94952 628 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 SH3PXD2AQ5TCZ1 1133 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 SYPL2Q5VXT5 272 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 ZDHHC17Q8IUH5 632 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 HS6ST3Q8IZP7 471 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 CFAP57Q96MR6 1250 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 SCML2Q9UQR0 700 aa28.77■■■□□ 2.2
SMARCD3-201ENST00000262188 NRG2O14511 850 aaPredicted RBP28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 CCP110O43303 1012 aa28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 PALMO75781 387 aa28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 CPP00450 1065 aa28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 HYAL1Q12794 435 aa28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 DEFB106AQ8N104 65 aa28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 RXFP2Q8WXD0 754 aa28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 XIRP2A4UGR9 3374 aa28.76■■■□□ 2.19
SMARCD3-201ENST00000262188 RTN3O95197 1032 aaPredicted RBP28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 LTFP02788 710 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 CALRP27797 417 aaKnown RBP28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 VEPH1Q14D04 833 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 TAF12Q16514 161 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 C15orf59Q2T9L4 293 aaPredicted RBP28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 BSPRYQ5W0U4 402 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 TMCO3Q6UWJ1 677 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 FBXO44Q9H4M3 255 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 MAFFQ9ULX9 164 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 YWHAGP61981 247 aaKnown RBP eCLIP28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 YWHAZP63104 245 aaKnown RBP28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 EFHC1Q5JVL4 640 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 ZNF569Q5MCW4 686 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 PSMG2Q969U7 264 aa28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 NSUN3Q9H649 340 aaKnown RBP28.75■■■□□ 2.19
SMARCD3-201ENST00000262188 C2CD4BA6NLJ0 364 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 ZMYND10O75800 440 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 MTA2O94776 668 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 CSH1P0DML2 217 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 CSH2P0DML3 217 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 PDGFRAP16234 1089 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 TCEAL1Q15170 157 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 CDO1Q16878 200 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 DCAF6Q58WW2 860 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 ADAM32Q8TC27 787 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 TTLL2Q9BWV7 592 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 APOL5Q9BWW9 433 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 PLEKHA4Q9H4M7 779 aa28.74■■■□□ 2.19
SMARCD3-201ENST00000262188 FAM92AA1XBS5 289 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 GLP2RO95838 553 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 FTCDO95954 541 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 IGFBP4P22692 258 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 CLCN6P51797 869 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 ATP11AP98196 1134 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 SLC35F6Q8N357 371 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 WDR24Q96S15 920 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 USTQ9Y2C2 406 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 GOLGA6L9A6NEM1 432 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 FANCGO15287 622 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 HSF2BPO75031 334 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 KCNC3Q14003 757 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 Q7L0L9 218 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 DAAM2Q86T65 1068 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 LRRC57Q8N9N7 239 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 CORO1BQ9BR76 489 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 POPDC2Q9HBU9 364 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 CDH22Q9UJ99 828 aa28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 PACSIN2Q9UNF0 486 aaPredicted RBP28.73■■■□□ 2.19
SMARCD3-201ENST00000262188 MYO1FO00160 1098 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 TADA3O75528 432 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 NCAM1P13591 858 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 TCF4P15884 667 aa28.72■■■□□ 2.19
SMARCD3-201ENST00000262188 PSMA2P25787 234 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms