RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 RTP1P59025 263 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 DPYSL3Q14195 570 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 HYIQ5T013 277 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 USP6NLQ92738 828 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 VCPIP1Q96JH7 1222 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 CEP19Q96LK0 163 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 KLHL25Q9H0H3 589 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 CISHQ9NSE2 258 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 LGALS13Q9UHV8 139 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 TMCO1Q9UM00 188 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-201ENST00000261646 SAC3D1A6NKF1 404 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 MEIS2O14770 477 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 NR3C2P08235 984 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 LINGO3P0C6S8 592 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 AMPD1P23109 780 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 STXBP2Q15833 593 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 ANO4Q32M45 955 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 SLITRK1Q96PX8 696 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 BCAS3Q9H6U6 928 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 LRRC42Q9Y546 428 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 SLIT3O75094 1523 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 PRKCBP05771 671 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 ME2P23368 584 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 POLD1P28340 1107 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 MAPK10P53779 464 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 ARL13BQ3SXY8 428 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 ZBTB46Q86UZ6 589 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 KREMEN1Q96MU8 473 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 C15orf38-AP3S2A0A0A6YYH1 394 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 C1orf232A0A0U1RR37 186 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 SDR42E2A6NKP2 422 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 MT-CO1P00395 513 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 VCLP18206 1134 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 GARTP22102 1010 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 DAB2P98082 770 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
SREBF1-201ENST00000261646 ARPINQ7Z6K5 226 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 TDRD5Q8NAT2 981 aaKnown RBP16.73■□□□□ 0.27
SREBF1-201ENST00000261646 KLHL23Q8NBE8 558 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 EPAS1Q99814 870 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 SIX2Q9NPC8 291 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 RRN3Q9NYV6 651 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 ANGPTL3Q9Y5C1 460 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 A0A0B4J269 797 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 DAB1O75553 588 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 ECHS1P30084 290 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 CYP2R1Q6VVX0 501 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 ADCK1Q86TW2 530 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 TAAR1Q96RJ0 339 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 PIDD1Q9HB75 910 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 MYRFQ9Y2G1 1151 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-201ENST00000261646 TM7SF2O76062 418 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 MSX2P35548 267 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-201ENST00000261646 NEK2P51955 445 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 MYL6P60660 151 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 GRM1Q13255 1194 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 EFHC2Q5JST6 749 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 MAN1C1Q9NR34 630 aa16.73■□□□□ 0.27
SREBF1-201ENST00000261646 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 CSDE1O75534 798 aaKnown RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 ARMCX2Q7L311 632 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 TMCO5AQ8N6Q1 288 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 WRNIP1Q96S55 665 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 DRG1Q9Y295 367 aaKnown RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 S100BP04271 92 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 OCM2P0CE71 109 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 OCMP0CE72 109 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 CCNB1P14635 433 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 HMOX2P30519 316 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 EIF2B2P49770 351 aaKnown RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 CNPY1Q3B7I2 92 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 DCAF15Q66K64 600 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 TRIM74Q86UV6 250 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 TRIM73Q86UV7 250 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 NAT14Q8WUY8 206 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 WNK4Q96J92 1243 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 RGPD1P0DJD0 1748 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 C16orf96A6NNT2 1141 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 NFIBO00712 420 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 ALBP02768 609 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 NELFEP18615 380 aaKnown RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 FGFR3P22607 806 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 SCNN1BP51168 640 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 EFNA5P52803 228 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 ITPRIPL1Q6GPH6 555 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 CASP10Q92851 521 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 PTPRN2Q92932 1015 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 DACT3Q96B18 629 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-201ENST00000261646 C17orf75Q9HAS0 396 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 AP4B1Q9Y6B7 739 aa16.72■□□□□ 0.27
SREBF1-201ENST00000261646 TCRBV9S1A1TA0A576 114 aa16.71■□□□□ 0.27
SREBF1-201ENST00000261646 CSPG5O95196 566 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms