RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 MICU3Q86XE3 530 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 IQCA1Q86XH1 822 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 ZNF34Q8IZ26 560 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 ZNF713Q8N859 430 aaPredicted RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 SPATA5Q8NB90 893 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 MYCBPAPQ8TBZ2 947 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 SMCR8Q8TEV9 937 aaPredicted RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 TMEM174Q8WUU8 243 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 ATRIPQ8WXE1 791 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 ZKSCAN4Q969J2 545 aaPredicted RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 TLCD1Q96CP7 247 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 PGM2Q96G03 612 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 TMEM176AQ96HP8 235 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 CCDC42Q96M95 316 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 INPP4AQ96PE3 977 aaPredicted RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 MPHOSPH6Q99547 160 aaKnown RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 LRRC1Q9BTT6 524 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 TXLNGYQ9BZA5 131 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 PCDH11XQ9BZA7 1347 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 PCDH11YQ9BZA8 1340 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 PUS3Q9BZE2 481 aaKnown RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 KIF13AQ9H1H9 1805 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 TAF1DQ9H5J8 278 aaPredicted RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 EBF2Q9HAK2 575 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 ATP6V0A4Q9HBG4 840 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 KCNMB3Q9NPA1 279 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 PIH1D3Q9NQM4 214 aaKnown RBP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 HOMER3Q9NSC5 361 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 AGPAT5Q9NUQ2 364 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 CTNNAL1Q9UBT7 734 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 NENFQ9UMX5 172 aa4.08□□□□□ -1.76
CDRT1-201ENST00000261644 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.08□□□□□ -1.76
CDRT1-201ENST00000261644 SPATA31A3Q5VYP0 1347 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 E7ENQ6 273 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 CRTAMO95727 393 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 STARD3NLO95772 234 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ASLP04424 464 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 SERPING1P05155 500 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 NUDT17P0C025 328 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 MYBL2P10244 700 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 SCG2P13521 617 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 IDEP14735 1019 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 GCFC2P16383 781 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 TRIM21P19474 475 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 NR1D1P20393 614 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 PROZP22891 400 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 PRKCIP41743 596 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 SKIV2L2P42285 1042 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 MAGEA1P43355 309 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 FNTBP49356 437 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 SLC18A1P54219 525 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 HADHBP55084 474 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 SMAD3P84022 425 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 SATB1Q01826 763 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 POU5F1Q01860 360 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 PPARAQ07869 468 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 BYSLQ13895 437 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ZKSCAN8Q15776 578 aaPredicted RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 RRP12Q5JTH9 1297 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 METTL24Q5JXM2 366 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 CATSPEREQ5SY80 951 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 HYIQ5T013 277 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ERMARDQ5T6L9 678 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 LAIR1Q6GTX8 287 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 CYB5RLQ6IPT4 315 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 MFSD5Q6N075 450 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 Q6ZRM9 215 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 UNC13DQ70J99 1090 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 MRGPREQ86SM8 312 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 RTN4RL1Q86UN2 441 aaPredicted RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 KIF18BQ86Y91 864 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ZC3H7AQ8IWR0 971 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 AHI1Q8N157 1196 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ENAHQ8N8S7 591 aaPredicted RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 GBP7Q8N8V2 638 aaPredicted RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ZNF473Q8WTR7 871 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 CHAC2Q8WUX2 184 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 LMBR1Q8WVP7 490 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 CCT6BQ92526 530 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 HAS1Q92839 578 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 E2F7Q96AV8 911 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ARL8AQ96BM9 186 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 FOXRED1Q96CU9 486 aaPredicted RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 CLUHP3Q96NS8 147 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ZIM3Q96PE6 472 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 RIOK1Q9BRS2 568 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 UBAC1Q9BSL1 405 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 TTPALQ9BTX7 342 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 IFIH1Q9BYX4 1025 aaKnown RBP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 HAPLN2Q9GZV7 340 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ZMYND12Q9H0C1 365 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 VPS16Q9H269 839 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 WDR26Q9H7D7 661 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 VEZTQ9HBM0 779 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 ATP8A2Q9NTI2 1148 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.07□□□□□ -1.76
CDRT1-201ENST00000261644 TRPS1Q9UHF7 1281 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 KCNJ14Q9UNX9 436 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 MYH3P11055 1940 aa4.07□□□□□ -1.76
CDRT1-201ENST00000261644 MYH6P13533 1939 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms