RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CPA3P15088 417 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 C19orf18Q8NEA5 215 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC10A4Q96EP9 437 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM237BA0A1B0GVD1 139 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 MYL3P08590 195 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TGM2P21980 687 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 FASP25445 335 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 ITGA9Q13797 1035 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 KLHL17Q6TDP4 642 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 ARHGEF19Q8IW93 802 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 RTKN2Q8IZC4 609 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TSPAN14Q8NG11 270 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM136AQ96C01 138 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 RIT2Q99578 217 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TCF7L2Q9NQB0 619 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 BLOC1S4Q9NUP1 217 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 MROH2AA6NES4 1674 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 IGSF9BQ9UPX0 1349 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM20BO75063 409 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 PTGER2P43116 358 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 KRT33BQ14525 404 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 N4BP2L1Q5TBK1 243 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIM74Q86UV6 250 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIM73Q86UV7 250 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 CENPLQ8N0S6 344 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 SELENONQ9NZV5 590 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 DIP2AQ14689 1571 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 NCF1BA6NI72 391 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 NCF1CA8MVU1 366 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 EEF2KO00418 725 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 KIAA0391O15091 583 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 GZMAP12544 262 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 NCF1P14598 390 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 GJA8P48165 433 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 RAD23AP54725 363 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 CSTF3Q12996 717 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 USP4Q13107 963 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 CYP2W1Q8TAV3 490 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 RBBP8Q99708 897 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 NIF3L1Q9GZT8 377 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 LRMDAQ9H2I8 198 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 PLGRKTQ9HBL7 147 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 CHST12Q9NRB3 414 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 POU1F1P28069 291 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 LSM3P62310 102 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 DGCR6Q14129 220 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 IL17AQ16552 155 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 SPDYE7PQ495Y7 208 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 CD302Q8IX05 232 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 HPS1Q92902 700 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 PLEKHA8Q96JA3 519 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 KCTD14Q9BQ13 255 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 A0A087WXM4 84 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 INPP4BO15327 924 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 GCLCP48506 637 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 CCT3P49368 545 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TMEM139Q8IV31 216 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 KRT35Q92764 455 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 CENPTQ96BT3 561 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TAAR1Q96RJ0 339 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 SRPK1Q96SB4 655 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 MMTAG2Q9BU76 263 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIM8Q9BZR9 551 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 GPATCH2LQ9NWQ4 482 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 GPRC5DQ9NZD1 345 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 REXO2Q9Y3B8 237 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 PIPSLA2A3N6 862 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 BAIAP3O94812 1187 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 TOMM70O94826 608 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 VAV1P15498 845 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF235Q14590 738 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 TMEM132DQ14C87 1099 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 CCNG2Q16589 344 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 DCAF6Q58WW2 860 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ABHD8Q96I13 439 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 IARS2Q9NSE4 1012 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 GGA2Q9UJY4 613 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 KLHL20Q9Y2M5 609 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 SNPHO15079 494 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PPP4CP60510 307 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 DGUOKQ16854 277 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 DHFR2Q86XF0 187 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 EMC1Q8N766 993 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 AFG1LQ8WV93 481 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 CHID1Q9BWS9 393 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 DCLK3Q9C098 648 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 HMG20AQ9NP66 347 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 FBXO40Q9UH90 709 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 TMEM191CA6NGB0 347 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 RAD51BO15315 384 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF682O95780 498 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 CDH3P22223 829 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 JAK1P23458 1154 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 SOX10P56693 466 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms