RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 HAS3O00219 553 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 FAM155BO75949 473 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 ENDOD1O94919 500 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 ELK3P41970 407 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 NOMO1Q15155 1222 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 SYPL2Q5VXT5 272 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
THSD1-201ENST00000258613 F8W810 466 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 RPA3P35244 121 aaPredicted RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 GSCP56915 257 aaPredicted RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 FKBP1BP68106 108 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 STAT4Q14765 748 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 DCAF6Q58WW2 860 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 GDF6Q6KF10 455 aaPredicted RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CDY2AQ9Y6F7 541 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 APRTP07741 180 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 GOT1P17174 413 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CYP2F1P24903 491 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 TAF6P49848 677 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 NME3Q13232 169 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 MDH1BQ5I0G3 518 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 PAQR9Q6ZVX9 377 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 LRRC52Q8N7C0 313 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 ANKRD52Q8NB46 1076 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CENPTQ96BT3 561 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 FAF2Q96CS3 445 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CCDC77Q9BR77 488 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 PLCD4Q9BRC7 762 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 TRABDQ9H4I3 376 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 AGO3Q9H9G7 860 aaKnown RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 SLCO1B3Q9NPD5 702 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 ST3GAL5Q9UNP4 418 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 SHOC2Q9UQ13 582 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 C5orf60A6NFR6 353 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CYB561D2O14569 222 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 HUS1O60921 280 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 STAU1O95793 577 aaKnown RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 STX2P32856 288 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CPT1AP50416 773 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CLCNKBP51801 687 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 MAP3K7CLP57077 242 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 FAM133BQ5BKY9 247 aaKnown RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 PRPF39Q86UA1 669 aaKnown RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 TRABD2AQ86V40 505 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 NT5DC4Q86YG4 428 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 PALM2Q8IXS6 379 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 USP6NLQ92738 828 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 CFAP36Q96G28 342 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 STMN4Q9H169 189 aaPredicted RBP13.65□□□□□ -0.22
THSD1-201ENST00000258613 ABCF3Q9NUQ8 709 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 MTMR10Q9NXD2 777 aa13.65□□□□□ -0.22
THSD1-201ENST00000258613 L1CAMP32004 1257 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 BST2Q10589 180 aaKnown RBP13.64□□□□□ -0.23
THSD1-201ENST00000258613 SLC1A5Q15758 541 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 TTC13Q8NBP0 860 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 B3GALNT2Q8NCR0 500 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 KCTD15Q96SI1 283 aaPredicted RBP13.64□□□□□ -0.23
THSD1-201ENST00000258613 LGMNQ99538 433 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 KIAA1257Q9ULG3 409 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 APOL1O14791 398 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 METTL18O95568 372 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 CHRNA1P02708 482 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 ARL4CP56559 192 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 YWHAGP61981 247 aaKnown RBP eCLIP13.64□□□□□ -0.23
THSD1-201ENST00000258613 GPRIN1Q7Z2K8 1008 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 SAPCD2Q86UD0 394 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 CCHCR1Q8TD31 782 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
THSD1-201ENST00000258613 AP4E1Q9UPM8 1137 aa13.64□□□□□ -0.23
THSD1-201ENST00000258613 BPTFQ12830 3046 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 MYBPHLA2RUH7 354 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 KBTBD13C9JR72 458 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 NRP1O14786 923 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 UGT1A9O60656 530 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 KRT4P19013 534 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 SCNN1GP51170 649 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 CRYBB1P53674 252 aaPredicted RBP13.63□□□□□ -0.23
THSD1-201ENST00000258613 CRADDP78560 199 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 DNAJC3Q13217 504 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 OLIG2Q13516 323 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 RELL1Q8IUW5 271 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.63□□□□□ -0.23
THSD1-201ENST00000258613 CCDC197Q8NCU1 140 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 TRIB2Q92519 343 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 MED10Q9BTT4 135 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 NRDE2Q9H7Z3 1164 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 UGT1A7Q9HAW7 530 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 UGT1A10Q9HAW8 530 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 UGT1A8Q9HAW9 530 aa13.63□□□□□ -0.23
THSD1-201ENST00000258613 LGALS13Q9UHV8 139 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms