RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 NFS1Q9Y697 457 aa9.47□□□□□ -0.89
CKAP2-201ENST00000258607 DCAF8L1A6NGE4 600 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 BTNL10A8MVZ5 291 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 H0Y3Z8 333 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 DNAJC6O75061 913 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 SPATA31D3P0C874 917 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 RPA3P35244 121 aaPredicted RBP9.46□□□□□ -0.89
CKAP2-201ENST00000258607 ZBTB16Q05516 673 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 TRMT10BQ6PF06 316 aaKnown RBP9.46□□□□□ -0.89
CKAP2-201ENST00000258607 TRIM72Q6ZMU5 477 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 SPATA31D4Q6ZUB0 917 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 PGBD4Q96DM1 585 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 CYP2S1Q96SQ9 504 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 TRABDQ9H4I3 376 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 NPHS2Q9NP85 383 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 KLHL8Q9P2G9 620 aaPredicted RBP9.46□□□□□ -0.89
CKAP2-201ENST00000258607 DDX20Q9UHI6 824 aaKnown RBP9.46□□□□□ -0.89
CKAP2-201ENST00000258607 PADI3Q9ULW8 664 aa9.46□□□□□ -0.89
CKAP2-201ENST00000258607 MAP1BP46821 2468 aaKnown RBP9.46□□□□□ -0.89
CKAP2-201ENST00000258607 FAM72CH0Y354 149 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 IL18RAPO95256 599 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 INHBAP08476 426 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 PIRTP0C851 137 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 MYBL1P10243 752 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 VDRP11473 427 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 ADRA1DP25100 572 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 EPHB2P29323 1055 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SLC1A1P43005 524 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 MSH2P43246 934 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 VCPP55072 806 aaKnown RBP9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SESN3P58005 492 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 ITIH3Q06033 890 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SEPT6Q14141 434 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 RCN2Q14257 317 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 KBTBD12Q3ZCT8 623 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 FAM72AQ5TYM5 149 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 CDCA2Q69YH5 1023 aaPredicted RBP9.46□□□□□ -0.9
CKAP2-201ENST00000258607 FAM72DQ6L9T8 149 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 HIBCHQ6NVY1 386 aaPredicted RBP9.46□□□□□ -0.9
CKAP2-201ENST00000258607 CENPUQ71F23 418 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 PRPF39Q86UA1 669 aaKnown RBP9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 FAM72BQ86X60 149 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 CIR1Q86X95 450 aaPredicted RBP9.46□□□□□ -0.9
CKAP2-201ENST00000258607 KIRREL3Q8IZU9 778 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 TTC9BQ8N6N2 239 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 ATAD1Q8NBU5 361 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SEC16BQ96JE7 1060 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 FAM111AQ96PZ2 611 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SEPT5Q99719 369 aaPredicted RBP9.46□□□□□ -0.9
CKAP2-201ENST00000258607 NACA2Q9H009 215 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 EPN3Q9H201 632 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 ZFYVE28Q9HCC9 887 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 PCMTD2Q9NV79 361 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 TMEM30AQ9NV96 361 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 RNF186Q9NXI6 227 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 MPP6Q9NZW5 540 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 STRIP2Q9ULQ0 834 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 STYXL1Q9Y6J8 313 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 F5P12259 2224 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 CPP00450 1065 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 AMHP03971 560 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 KRT7P08729 469 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 RARGP13631 454 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 ARL4AP40617 200 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 GHRHRQ02643 423 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 DEUP1Q05D60 604 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 GRB14Q14449 540 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SURF1Q15526 300 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 B3GALNT2Q8NCR0 500 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 TRPV1Q8NER1 839 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 SGF29Q96ES7 293 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 FAM81BQ96LP2 452 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 TMEM237Q96Q45 408 aa9.46□□□□□ -0.9
CKAP2-201ENST00000258607 IGKV6-21A0A0C4DH24 114 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 SIGLEC16A6NMB1 481 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 APOL1O14791 398 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 GABBR2O75899 941 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 THP07101 528 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 AVPR1AP37288 418 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 RGS2P41220 211 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 ATXN3P54252 364 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-201ENST00000258607 SNRPFP62306 86 aaKnown RBP9.45□□□□□ -0.9
CKAP2-201ENST00000258607 CCNG2Q16589 344 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 HEATR6Q6AI08 1181 aaKnown RBP9.45□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF677Q86XU0 584 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 PCDH19Q8TAB3 1148 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 MAML1Q92585 1016 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 SMC6Q96SB8 1091 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 SLC17A7Q9P2U7 560 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 PCYOX1Q9UHG3 505 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 FEZ2Q9UHY8 353 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-201ENST00000258607 A0A0U1RQS6 177 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 PSTPIP1O43586 416 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 PPFIA2O75334 1257 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 PMPCBO75439 489 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 TRUB2O95900 331 aaKnown RBP9.45□□□□□ -0.9
CKAP2-201ENST00000258607 IRF1P10914 325 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 DESP17661 470 aa9.45□□□□□ -0.9
CKAP2-201ENST00000258607 CDC25CP30307 473 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms