RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 HMG20AQ9NP66 347 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 POLG2Q9UHN1 485 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SH3BP1Q9Y3L3 701 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 DYTNA2CJ06 578 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PPP2R1BP30154 601 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CACNA2D1P54289 1103 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RAD23AP54725 363 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 DGUOKQ16854 277 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PDPK2PQ6A1A2 396 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RINLQ6ZS11 566 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 TMEM26Q6ZUK4 368 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ATG9AQ7Z3C6 839 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CDH24Q86UP0 819 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 OR6Y1Q8NGX8 325 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 NSUN4Q96CB9 384 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 APOPT1Q96IL0 206 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 TEX13BQ9BXU2 312 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RUVBL2Q9Y230 463 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 F8VZ95 297 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PRRG1O14668 218 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CD3EAPO15446 510 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CYP2C8P10632 490 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PIK3R1P27986 724 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 GEMP55040 296 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 POLD3Q15054 466 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 DGKDQ16760 1214 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 GRTP1Q5TC63 336 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 KLHL17Q6TDP4 642 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 LRRC49Q8IUZ0 686 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CD302Q8IX05 232 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SLC25A41Q8N5S1 370 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SLC20A1Q8WUM9 679 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 DLG3Q92796 817 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 KCNB2Q92953 911 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 NMD3Q96D46 503 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 C6orf203Q9P0P8 240 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RABGEF1Q9UJ41 708 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 KIAA1257Q9ULG3 409 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 C15orf41Q9Y2V0 281 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 TRPM6Q9BX84 2022 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FAM25AB3EWG3 89 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FAM25CB3EWG5 89 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FAM25GB3EWG6 89 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 MED26O95402 600 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 JAK1P23458 1154 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CRABP2P29373 138 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PRDX5P30044 214 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 GRK4P32298 578 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RGS7P49802 495 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CPT1AP50416 773 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 LMBRD2Q68DH5 695 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PMF1Q6P1K2 205 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 C11orf88Q6PI97 169 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ADCK2Q7Z695 626 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SP8Q8IXZ3 490 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PIK3R5Q8WYR1 880 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 DPF2Q92785 391 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 OXNAD1Q96HP4 312 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ZNF512Q96ME7 567 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 IRX2Q9BZI1 471 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 DPP3Q9NY33 737 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CRLS1Q9UJA2 301 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PLAGL2Q9UPG8 496 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 USP31Q70CQ4 1352 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CRTAMO95727 393 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ZNF682O95780 498 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RPLP2P05387 115 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PLEKP08567 350 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ZCCHC18P0CG32 403 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 MYL12AP19105 171 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FASP25445 335 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 PTPN7P35236 360 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CPA2P48052 419 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SARSP49591 514 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 OTUD4Q01804 1114 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 MYBPC2Q14324 1141 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RABL6Q3YEC7 729 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 KYAT3Q6YP21 454 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 AGPAT3Q9NRZ7 376 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SRP68Q9UHB9 627 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 CKAP5Q14008 2032 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ZNFX1Q9P2E3 1918 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FAM47E-STBD1D6RA91 191 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 F8W810 466 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ATP9AO75110 1047 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ALDH1A2O94788 518 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FSBPO95073 299 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ANXA6P08133 673 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 RPA1P27694 616 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SEC24CP53992 1094 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 BCAT1P54687 386 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 R3HDM1Q15032 1099 aaKnown RBP4.94□□□□□ -1.62
RC3H1-201ENST00000258349 SNX30Q5VWJ9 437 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 DENND1BQ6P3S1 775 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 MIER2Q8N344 545 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 ISCA1Q9BUE6 129 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 TCF7L2Q9NQB0 619 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FAM49BQ9NUQ9 324 aa4.94□□□□□ -1.62
RC3H1-201ENST00000258349 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.94□□□□□ -1.621e-6■■■□□ 16.4
RC3H1-201ENST00000258349 PCDHB7Q9Y5E2 793 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms