RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SYPL2Q5VXT5 272 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 KCTD16Q68DU8 428 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 TMEM173Q86WV6 379 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 SH2D3CQ8N5H7 860 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 SNRNP25Q9BV90 132 aaKnown RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 COX16Q9P0S2 106 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 MYO16Q9Y6X6 1858 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 CST8O60676 142 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 DAB1O75553 588 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 PARNO95453 639 aaKnown RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 CYP2F1P24903 491 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 ARCQ7LC44 396 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 TMCO2Q7Z6W1 182 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 RFX6Q8HWS3 928 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 SPATA2LQ8IUW3 424 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 IQCKQ8N0W5 287 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 CENPIQ92674 756 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 RUNDC3BQ96NL0 473 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 PRDM5Q9NQX1 630 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 FAM114A2Q9NRY5 505 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 DNPEPQ9ULA0 475 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 NAALADL1Q9UQQ1 740 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 HOXA2O43364 376 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 OAZ2O95190 189 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 DESP17661 470 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 RPL21P46778 160 aaKnown RBP19.71■□□□□ 0.75
TRIM47-201ENST00000254816 PRUNE1Q86TP1 453 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 MREGQ8N565 214 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 COLEC11Q9BWP8 271 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 FYNP06241 537 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 GALTP07902 379 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 ARSEP51690 589 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 IFRD2Q12894 506 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-201ENST00000254816 IKBKEQ14164 716 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 DPYSL3Q14195 570 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 MAPRE1Q15691 268 aaKnown RBP19.71■□□□□ 0.75
TRIM47-201ENST00000254816 TAZQ16635 292 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 OTUD1Q5VV17 481 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-201ENST00000254816 TTC19Q6DKK2 380 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-201ENST00000254816 CCDC185Q8N715 623 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 ATL2Q8NHH9 583 aa19.71■□□□□ 0.75
TRIM47-201ENST00000254816 DMAP1Q9NPF5 467 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-201ENST00000254816 ABI2Q9NYB9 513 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-201ENST00000254816 LIASO43766 372 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 ZBED1O96006 694 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 KRT81Q14533 505 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 CNKSR3Q6P9H4 555 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 STKLD1Q8NE28 680 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 BCL7CQ8WUZ0 217 aaPredicted RBP19.7■□□□□ 0.74
TRIM47-201ENST00000254816 ZCWPW1Q9H0M4 648 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 POPDC2Q9HBU9 364 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 CNGB3Q9NQW8 809 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 HOMER3Q9NSC5 361 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 LTBP2Q14767 1821 aa19.7■□□□□ 0.74
TRIM47-201ENST00000254816 CAPN15O75808 1086 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 ENDOD1O94919 500 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 FBXO21O94952 628 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 NOS2P35228 1153 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 GRIK1P39086 918 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 SKIDA1Q1XH10 827 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 SLC25A52Q3SY17 297 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 BOLA3Q53S33 107 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 FUT10Q6P4F1 479 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 BHLHA9Q7RTU4 235 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 FAM131BQ86XD5 332 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 SCAMP5Q8TAC9 235 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 ADAM32Q8TC27 787 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 SLCO2A1Q92959 643 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 PGLYRP2Q96PD5 576 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 MRPL9Q9BYD2 267 aaKnown RBP19.69■□□□□ 0.74
TRIM47-201ENST00000254816 GRHL1Q9NZI5 618 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 TRIM43BA6NCK2 446 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 SYN3O14994 580 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 OTUD4Q01804 1114 aaKnown RBP19.69■□□□□ 0.74
TRIM47-201ENST00000254816 CTXN3Q4LDR2 81 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 ERMARDQ5T6L9 678 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 FAM117BQ6P1L5 589 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 C4orf50Q6ZRC1 276 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 TAS1R1Q7RTX1 841 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 ANKLE1Q8NAG6 615 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 TRIM43Q96BQ3 446 aaPredicted RBP19.69■□□□□ 0.74
TRIM47-201ENST00000254816 SLC2A13Q96QE2 648 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 C10orf88Q9H8K7 445 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 TMPRSS4Q9NRS4 437 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 PLAAQ9Y263 795 aa19.69■□□□□ 0.74
TRIM47-201ENST00000254816 M0QYT0 321 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 CAPN9O14815 690 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 IL4RP24394 825 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 HSPA9P38646 679 aaKnown RBP19.68■□□□□ 0.74
TRIM47-201ENST00000254816 VPS41P49754 854 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 PLTPP55058 493 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 ARPP19P56211 112 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 NME3Q13232 169 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 BYSLQ13895 437 aaKnown RBP19.68■□□□□ 0.74
TRIM47-201ENST00000254816 PPP6R3Q5H9R7 873 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-201ENST00000254816 ZDHHC24Q6UX98 284 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 NPNTQ6UXI9 565 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 BBS12Q6ZW61 710 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 SCN4BQ8IWT1 228 aa19.68■□□□□ 0.74
TRIM47-201ENST00000254816 ACTL9Q8TC94 416 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms