RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 AFDNP55196 1824 aaKnown RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 RTN3O95197 1032 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 NCKAP1LP55160 1127 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 TBX4P57082 545 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 MAPK7Q13164 816 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 SLC29A2Q14542 456 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 LRRC36Q1X8D7 754 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 STRA8Q7Z7C7 330 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 PHACTR4Q8IZ21 702 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 COLGALT1Q8NBJ5 622 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 SGF29Q96ES7 293 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ECSITQ9BQ95 431 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ILKAPQ9H0C8 392 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ASCC2Q9H1I8 757 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 MYPNQ86TC9 1320 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 DYRK3O43781 588 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ADCY3O60266 1144 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 PLA2G6O60733 806 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 WDR47O94967 919 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 MAP3K6O95382 1288 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 NEK2P51955 445 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 PTPN11Q06124 597 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ADIGQ0VDE8 80 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ACVR2BQ13705 512 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 CCDC157Q569K6 752 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ARHGEF19Q8IW93 802 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 LPCAT1Q8NF37 534 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 REPS2Q8NFH8 660 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 CNPY3Q9BT09 278 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 LACTBL1A8MY62 500 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 CCDC130P13994 396 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ELAVL2Q12926 359 aaKnown RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 PPIL2Q13356 520 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 TMEM119Q4V9L6 283 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 SLC27A1Q6PCB7 646 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ZDHHC17Q8IUH5 632 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 CCDC60Q8IWA6 550 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 RXFP2Q8WXD0 754 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 JADE3Q92613 823 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 TBL1YQ9BQ87 522 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 CCDC134Q9H6E4 229 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 ZCCHC17Q9NP64 241 aaKnown RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 SPG21Q9NZD8 308 aa8.98□□□□□ -0.97
PTCD3-201ENST00000254630 UXTQ9UBK9 157 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-201ENST00000254630 RASSF10A6NK89 507 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 F8W810 466 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 H3BRB1 525 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PCDH8O95206 1070 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 GRK3P35626 688 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PRIM2P49643 509 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 NDST1P52848 882 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 COPAP53621 1224 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 ERVK-9P63128 1117 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 FSCN1Q16658 493 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CYP51A1Q16850 503 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PPM1LQ5SGD2 360 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 OVOS1Q6IE37 1185 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 TDRD5Q8NAT2 981 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 ENGASEQ8NFI3 743 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CASP10Q92851 521 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 KCNB2Q92953 911 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 SERAC1Q96JX3 654 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PDCD2LQ9BRP1 358 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 MRPL9Q9BYD2 267 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 DNAJC5Q9H3Z4 198 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 TUT1Q9H6E5 874 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 MPP6Q9NZW5 540 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 ZNF229Q9UJW7 825 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 BLOC1S6Q9UL45 172 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 B2RBV5 119 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CAND2O75155 1236 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PKN1Q16512 942 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 DEPDC1Q5TB30 811 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 KHDRBS2Q5VWX1 349 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 EXD1Q8NHP7 514 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 MED8Q96G25 268 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CNDP1Q96KN2 507 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 VANGL2Q9ULK5 521 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 MROH1Q8NDA8 1641 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 SKAP2O75563 359 aaPredicted RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 WEE1P30291 646 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CCR1P32246 355 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 MAPK9P45984 424 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 WLSQ5T9L3 541 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 IL17RBQ9NRM6 502 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PHTF1Q9UMS5 762 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 TIMM13Q9Y5L4 95 aaPredicted RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 BCL9O00512 1426 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PROSCO94903 275 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CPSF4O95639 269 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 PSMA4P25789 261 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CCNG1P51959 295 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 FNDC3BQ53EP0 1204 aaKnown RBP8.97□□□□□ -0.97
PTCD3-201ENST00000254630 FAM171A1Q5VUB5 890 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 IYDQ6PHW0 289 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CSGALNACT1Q8TDX6 532 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CDCA5Q96FF9 252 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 CNBD2Q96M20 576 aa8.97□□□□□ -0.97
PTCD3-201ENST00000254630 GLIS2Q9BZE0 524 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms