RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 HIST1H2AGP0C0S8 130 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 HIST1H2ADP20671 130 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 STAT3P40763 770 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 NAA20P61599 178 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 TOP3AQ13472 1001 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 SDE2Q6IQ49 451 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 STK32CQ86UX6 486 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 HIST1H2AHQ96KK5 128 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 HIST1H2AJQ99878 128 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 H2AFJQ9BTM1 129 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 CROTQ9UKG9 612 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 PCDHB2Q9Y5E7 798 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 GPC6Q9Y625 555 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 TNPO2O14787 897 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 KRT36O76013 467 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 EIF2AK2P19525 551 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 IFI35P80217 286 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 NFX1Q12986 1120 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 PWP1Q13610 501 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 QPRTQ15274 297 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZSWIM7Q19AV6 140 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 AGKQ53H12 422 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 TTMPQ5BVD1 217 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 DYRK4Q9NR20 520 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 ING3Q9NXR8 418 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 BARHL2Q9NY43 387 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 ABCB11O95342 1321 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 E2F8A0AVK6 867 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 ATG7O95352 703 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 PDGFRAP16234 1089 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 CCT8P50990 548 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 HERVK_113P62684 666 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 SPIDRQ14159 915 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 KRT33BQ14525 404 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 MAPK6Q16659 721 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 PARP6Q2NL67 630 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 EGFLAMQ63HQ2 1017 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 DENND5AQ6IQ26 1287 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 EID3Q8N140 333 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 LRRC17Q8N6Y2 441 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 UXS1Q8NBZ7 420 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 TEX13BQ9BXU2 312 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 THAP1Q9NVV9 213 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 SPEF1Q9Y4P9 236 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 TIMM44O43615 452 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 PROCP04070 461 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 CPA3P15088 417 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 PTPN7P35236 360 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 FLT3P36888 993 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 KLK7P49862 253 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP46P62068 366 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZFP69Q49AA0 526 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 SAMD4BQ5PRF9 694 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 CKAP2Q8WWK9 683 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 CPA5Q8WXQ8 436 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZFYVE1Q9HBF4 777 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 SUPT7LO94864 414 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 ANPEPP15144 967 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 ITGAXP20702 1163 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 POLD3Q15054 466 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 AGAP9Q5VTM2 703 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 TTC23Q5W5X9 447 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 TYW3Q6IPR3 259 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 EEPD1Q7L9B9 569 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 FAM160B2Q86V87 743 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 GRPEL2Q8TAA5 225 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF398Q8TD17 642 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF75CPQ92670 426 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 CDRT15Q96T59 188 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 PRRG3Q9BZD7 231 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 MOV10Q9HCE1 1003 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 PNPLA3Q9NST1 481 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 SLC5A4Q9NY91 659 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 ARMCX1Q9P291 453 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 AFF4Q9UHB7 1163 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 MEGF6O75095 1541 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 MEI4A8MW99 385 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 INPP4BO15327 924 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 CCNKO75909 580 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 FAM153BP0C7A2 387 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 MRPS22P82650 360 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 PTK6Q13882 451 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 FAM153CQ494X1 144 aa13.55□□□□□ -0.24
PCDHGA3-201ENST00000253812 RNF220Q5VTB9 566 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms