RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CGRRF1Q99675 332 aa4.31□□□□□ -1.72
UBE4A-201ENST00000252108 XAB2Q9HCS7 855 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 FNDC3AQ9Y2H6 1198 aaKnown RBP4.31□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF487B1APH4 448 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 B2RBV5 119 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SLCO1B7G3V0H7 640 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ATMINO43313 823 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CSDE1O75534 798 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 UBA1P22314 1058 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PEX3P56589 373 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ACTR2P61160 394 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MTMR2Q13614 643 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 DLGAP5Q15398 846 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 FAM160B1Q5W0V3 765 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 KAZNQ674X7 775 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TSHZ1Q6ZSZ6 1077 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF534Q76KX8 674 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SLC26A11Q86WA9 606 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 RIOX2Q8IUF8 465 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 BRSK2Q8IWQ3 736 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 NIM1KQ8IY84 436 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 FAM13CQ8NE31 585 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TCHPQ9BT92 498 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SDCBP2Q9H190 292 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 RPAP3Q9H6T3 665 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 NSMCE4AQ9NXX6 385 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CCPG1Q9ULG6 757 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CDY2AQ9Y6F7 541 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CDY1Q9Y6F8 540 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PLXNA4Q9HCM2 1894 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SLC16A4O15374 487 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TPBGLP0DKB5 382 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PSMA2P25787 234 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CDKN2BP42772 138 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 KCNJ1P48048 391 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 BASP1P80723 227 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PTK7Q13308 1070 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TFDP1Q14186 410 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 OTUD1Q5VV17 481 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 KCTD6Q8NC69 237 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SLC7A14Q8TBB6 771 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ZSCAN18Q8TBC5 510 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TRPM4Q8TD43 1214 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF483Q8TF39 744 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TFAP2BQ92481 460 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 DLG3Q92796 817 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 BTBD6Q96KE9 485 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 FAM167AQ96KS9 214 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 KLHL4Q9C0H6 718 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 NACA2Q9H009 215 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 C2orf40Q9H1Z8 148 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 NRDE2Q9H7Z3 1164 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 RAVER2Q9HCJ3 691 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 HACL1Q9UJ83 578 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SOX13Q9UN79 622 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 DOCK4Q8N1I0 1966 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CASP8AP2Q9UKL3 1982 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SCN8AQ9UQD0 1980 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 B4GALT4O60513 344 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 GLRA3O75311 464 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ASMTLO95671 621 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ZBED1O96006 694 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CST3P01034 146 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PRKCGP05129 697 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 HARSP12081 509 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CCDC130P13994 396 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 KRT4P19013 534 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 EFNA5P52803 228 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 GPX6P59796 221 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 IGBP1P78318 339 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 R3HDM1Q15032 1099 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 EFHC2Q5JST6 749 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 MARCH8Q5T0T0 291 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 NSMFQ6X4W1 530 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 KYAT3Q6YP21 454 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ATG14Q6ZNE5 492 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 C4orf50Q6ZRC1 276 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ACAD11Q709F0 780 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ADGRG6Q86SQ4 1221 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ECHDC2Q86YB7 292 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 HS6ST3Q8IZP7 471 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 FITM2Q8N6M3 262 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SCG3Q8WXD2 468 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 BTBD9Q96Q07 612 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 GORASP1Q9BQQ3 440 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 C11orf70Q9BRQ4 267 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 LHX5Q9H2C1 402 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 ACSS3Q9H6R3 686 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 SPON1Q9HCB6 807 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 AGAP1Q9UPQ3 857 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 CSADQ9Y600 493 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 DENND3A2RUS2 1198 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 KLF11O14901 512 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 LIASO43766 372 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 RRM1P23921 792 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 PRDX6P30041 224 aa4.3□□□□□ -1.72
UBE4A-201ENST00000252108 WDR4P57081 412 aaKnown RBP4.3□□□□□ -1.72
UBE4A-201ENST00000252108 EN1Q05925 392 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms