RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 ZC3H7BQ9UGR2 993 aaKnown RBP17.07■□□□□ 0.32
HOXD3-201ENST00000249440 ZNF180Q9UJW8 692 aa17.07■□□□□ 0.32
HOXD3-201ENST00000249440 TRIP11Q15643 1979 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 COPEO14579 308 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 OSBPP22059 807 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 CALB2P22676 271 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 RGS7P49802 495 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
HOXD3-201ENST00000249440 GOLGA7BQ2TAP0 167 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 WASHC2DQ5SRD0 308 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 C4orf22Q6V702 233 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 PQLC3Q8N755 202 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 PPM1NQ8N819 430 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 MAB21L3Q8N8X9 362 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 FAM172AQ8WUF8 416 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 ANKRD27Q96NW4 1050 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 PAPPA2Q9BXP8 1791 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 TLE6Q9H808 572 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 PCDH18Q9HCL0 1135 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 ETNK2Q9NVF9 386 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 KANSL3Q9P2N6 904 aa17.06■□□□□ 0.32
HOXD3-201ENST00000249440 E7ENQ6 273 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 MDM4O15151 490 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 CCDC22O60826 627 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 FAM155BO75949 473 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 IL1BP01584 269 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 SNRPAP09012 282 aaKnown RBP17.05■□□□□ 0.32
HOXD3-201ENST00000249440 SLC6A3Q01959 620 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 ANKRD20A2Q5SQ80 823 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 ANKRD20A1Q5TYW2 823 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 ANKRD20A3Q5VUR7 823 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 OLFML1Q6UWY5 402 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 PRPF39Q86UA1 669 aaKnown RBP17.05■□□□□ 0.32
HOXD3-201ENST00000249440 LRRC39Q96DD0 335 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 ZNF670Q9BS34 389 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 MROH8Q9H579 483 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 TTLL3Q9Y4R7 772 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 ASB14A6NK59 587 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 KLF11O14901 512 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 DNAJC6O75061 913 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 HAUS5O94927 633 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 VTNP04004 478 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 LGALS2P05162 132 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 APRTP07741 180 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 MAGEA6P43360 314 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 SNX16P57768 344 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 LAMC2Q13753 1193 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 CRYMQ14894 314 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 PPP1R26Q5T8A7 1209 aaPredicted RBP17.05■□□□□ 0.32
HOXD3-201ENST00000249440 PMF1Q6P1K2 205 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 SULF1Q8IWU6 871 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 PCDH19Q8TAB3 1148 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 STK32AQ8WU08 396 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 APBB2Q92870 758 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 DCPSQ96C86 337 aaKnown RBP17.05■□□□□ 0.32
HOXD3-201ENST00000249440 SRPK1Q96SB4 655 aaKnown RBP17.05■□□□□ 0.32
HOXD3-201ENST00000249440 BATF3Q9NR55 127 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 GPATCH2LQ9NWQ4 482 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 CNTN3Q9P232 1028 aa17.05■□□□□ 0.32
HOXD3-201ENST00000249440 TRIM49D1C9J1S8 452 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 PEX11AO75192 247 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 C1QAP02745 245 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 GSTA2P09210 222 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 SETSIPP0DME0 302 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 BGNP21810 368 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 PRKCHP24723 683 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 GCLCP48506 637 aaPredicted RBP17.04■□□□□ 0.32
HOXD3-201ENST00000249440 SERPINB4P48594 390 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 TMEM110Q86TL2 294 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 CAND1Q86VP6 1230 aaKnown RBP17.04■□□□□ 0.32
HOXD3-201ENST00000249440 SH3TC2Q8TF17 1288 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 NLRP7Q8WX94 980 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 KIF12Q96FN5 646 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 SNRNP25Q9BV90 132 aaKnown RBP17.04■□□□□ 0.32
HOXD3-201ENST00000249440 KCNK13Q9HB14 408 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 POPDC2Q9HBU9 364 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 NMRK2Q9NPI5 230 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 SLC5A4Q9NY91 659 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 NUMBLQ9Y6R0 609 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 DLDP09622 509 aaKnown RBP17.04■□□□□ 0.32
HOXD3-201ENST00000249440 CDK16Q00536 496 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 ZBTB16Q05516 673 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 ARHGAP1Q07960 439 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 SCUBE3Q8IX30 993 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 MCUQ8NE86 351 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 ZNF570Q96NI8 536 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 NUDCD1Q96RS6 583 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 TMEM120AQ9BXJ8 343 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 SLC4A5Q9BY07 1137 aa17.04■□□□□ 0.32
HOXD3-201ENST00000249440 ZNF487B1APH4 448 aa17.03■□□□□ 0.32
HOXD3-201ENST00000249440 SERPINB3P29508 390 aa17.03■□□□□ 0.32
HOXD3-201ENST00000249440 NAA25Q14CX7 972 aa17.03■□□□□ 0.32
HOXD3-201ENST00000249440 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
HOXD3-201ENST00000249440 PPP6R3Q5H9R7 873 aaPredicted RBP17.03■□□□□ 0.32
HOXD3-201ENST00000249440 FAXCQ5TGI0 409 aa17.03■□□□□ 0.32
HOXD3-201ENST00000249440 SESTD1Q86VW0 696 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms