RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CARD9Q9H257 536 aa13.54□□□□□ -0.24
LSM8-201ENST00000249299 CRISPLD1Q9H336 500 aa13.54□□□□□ -0.24
LSM8-201ENST00000249299 SLC27A5Q9Y2P5 690 aa13.54□□□□□ -0.24
LSM8-201ENST00000249299 YIPF1Q9Y548 306 aa13.54□□□□□ -0.24
LSM8-201ENST00000249299 PCDHA3Q9Y5H8 950 aa13.54□□□□□ -0.24
LSM8-201ENST00000249299 SAR1BQ9Y6B6 198 aa13.54□□□□□ -0.24
LSM8-201ENST00000249299 YJEFN3A6XGL0 299 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 E7ENQ6 273 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 CAPN9O14815 690 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 PAPLNO95428 1278 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 SEC24AO95486 1093 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 KRT7P08729 469 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 ZDHHC11BP0C7U3 371 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 ATF6P18850 670 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 PBX2P40425 430 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 CLCN4P51793 760 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 CCDC14Q49A88 953 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 PABPC1LQ4VXU2 614 aaKnown RBP13.53□□□□□ -0.24
LSM8-201ENST00000249299 BSPRYQ5W0U4 402 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 LLGL2Q6P1M3 1020 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 PHLDB2Q86SQ0 1253 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 TADA2BQ86TJ2 420 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 SCAMP5Q8TAC9 235 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 MICAL1Q8TDZ2 1067 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 AUTS2Q8WXX7 1259 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 PSMG2Q969U7 264 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 TIFAQ96CG3 184 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 PIWIL1Q96J94 861 aaKnown RBP13.53□□□□□ -0.24
LSM8-201ENST00000249299 NPY6RQ99463 290 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 TRIM7Q9C029 511 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 NKX2-4Q9H2Z4 354 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 TLR8Q9NR97 1041 aaKnown RBP13.53□□□□□ -0.24
LSM8-201ENST00000249299 OLA1Q9NTK5 396 aaKnown RBP13.53□□□□□ -0.24
LSM8-201ENST00000249299 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 CHORDC1Q9UHD1 332 aaPredicted RBP13.53□□□□□ -0.24
LSM8-201ENST00000249299 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 INSL5Q9Y5Q6 135 aa13.53□□□□□ -0.24
LSM8-201ENST00000249299 SLC38A8A6NNN8 435 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 SLC34A2O95436 690 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 FGF19O95750 216 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 FTCDO95954 541 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 FYNP06241 537 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 HNRNPA1P09651 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
LSM8-201ENST00000249299 PFKLP17858 780 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 TUBP50607 506 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 YWHAGP61981 247 aaKnown RBP eCLIP13.52□□□□□ -0.25
LSM8-201ENST00000249299 AMPD2Q01433 879 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 OGDHQ02218 1023 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 ZNF252P-AS1Q0IIN9 211 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 NNTQ13423 1086 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 ACBD5Q5T8D3 534 aaPredicted RBP13.52□□□□□ -0.25
LSM8-201ENST00000249299 PLPP4Q5VZY2 271 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 CC2D1AQ6P1N0 951 aaPredicted RBP13.52□□□□□ -0.25
LSM8-201ENST00000249299 MSANTD2Q6P1R3 559 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 KLHDC10Q6PID8 442 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 VSIG1Q86XK7 387 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 DEFB106AQ8N104 65 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 TTC9BQ8N6N2 239 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 LEMD2Q8NC56 503 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 KREMEN2Q8NCW0 462 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 TEKT4Q8WW24 435 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 DDX56Q9NY93 547 aaKnown RBP13.52□□□□□ -0.25
LSM8-201ENST00000249299 TTC7AQ9ULT0 858 aaPredicted RBP13.52□□□□□ -0.25
LSM8-201ENST00000249299 NLRC5Q86WI3 1866 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 PTPRDP23468 1912 aa13.52□□□□□ -0.25
LSM8-201ENST00000249299 KIAA1671Q9BY89 1806 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 HIDE1A8MVS5 230 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 PIK3R2O00459 728 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 FANCGO15287 622 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 CLASP2O75122 1294 aaKnown RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 LRCH4O75427 683 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 ATP1A1P05023 1023 aaKnown RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 RALAP11233 206 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 NCAM1P13591 858 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 HMGA1P17096 107 aaKnown RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 GBP1P32455 592 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 PEX5P50542 639 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 KPNA1P52294 538 aaPredicted RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 ZNF135P52742 658 aaPredicted RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 RWDD2BP57060 319 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 RNASE9P60153 205 aaKnown RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 COPS2P61201 443 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 TAF5Q15542 800 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 DCAF6Q58WW2 860 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 BTBD8Q5XKL5 378 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 TRNP1Q6NT89 227 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 SCD5Q86SK9 330 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 KATNAL2Q8IYT4 538 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 ELMOD1Q8N336 334 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 EMC1Q8N766 993 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 CLEC4CQ8WTT0 213 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 SLC22A17Q8WUG5 538 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 ZNF592Q92610 1267 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 FBXO32Q969P5 355 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 MRPL38Q96DV4 380 aaKnown RBP13.51□□□□□ -0.25
LSM8-201ENST00000249299 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
LSM8-201ENST00000249299 L2HGDHQ9H9P8 463 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms