RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 IL1RAPL1Q9NZN1 696 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 H7C0C1 242 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 ASPAP45381 313 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 ATP5OP48047 213 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 STX3Q13277 289 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 LRRC36Q1X8D7 754 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 CFAP157Q5JU67 520 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 FAXCQ5TGI0 409 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
DDX55-201ENST00000238146 MARK2Q7KZI7 788 aaKnown RBP16.1■□□□□ 0.17
DDX55-201ENST00000238146 DHDDSQ86SQ9 333 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 WNK4Q96J92 1243 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 PEBP4Q96S96 227 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 LHX5Q9H2C1 402 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 PGAP2Q9UHJ9 254 aa16.1■□□□□ 0.17
DDX55-201ENST00000238146 DOCK5Q9H7D0 1870 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 ARHGAP42A6NI28 874 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 FAM189A1O60320 539 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 KRT38O76015 456 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 ENDOD1O94919 500 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 TOP3BO95985 862 aaKnown RBP16.09■□□□□ 0.17
DDX55-201ENST00000238146 ERBB2P04626 1255 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 CRHR1P34998 444 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 TUBB3Q13509 450 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 SFT2D3Q587I9 215 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 EFHC1Q5JVL4 640 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 ZBTB33Q86T24 672 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
DDX55-201ENST00000238146 APBB2Q92870 758 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 PAK5Q9P286 719 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 SORCS3Q9UPU3 1222 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 KIAA1217Q5T5P2 1943 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 H0YIN7 160 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 BIRC5O15392 142 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 APOEP02649 317 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 OSBPP22059 807 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 CDH6P55285 790 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 MTMR2Q13614 643 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 SUPT20HL1Q3ZLR7 823 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 MROH9Q5TGP6 573 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 STKLD1Q8NE28 680 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
DDX55-201ENST00000238146 HAPLN3Q96S86 360 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 TRIM56Q9BRZ2 755 aaKnown RBP16.09■□□□□ 0.17
DDX55-201ENST00000238146 XAB2Q9HCS7 855 aaKnown RBP16.09■□□□□ 0.17
DDX55-201ENST00000238146 THAP1Q9NVV9 213 aa16.09■□□□□ 0.17
DDX55-201ENST00000238146 RAD17O75943 681 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 MAP3K10Q02779 954 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 ASPHQ12797 758 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 TRPC3Q13507 836 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 DUOXA2Q1HG44 320 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 ZNF699Q32M78 642 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 RALGPS1Q5JS13 557 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 LPCAT4Q643R3 524 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 STYK1Q6J9G0 422 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 TRMT10BQ6PF06 316 aaKnown RBP16.08■□□□□ 0.16
DDX55-201ENST00000238146 C1orf228Q6PIY5 440 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 UNC5AQ6ZN44 842 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 ARHGAP22Q7Z5H3 698 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 ADGRF2Q8IZF7 708 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 ST13P4Q8IZP2 240 aaPredicted RBP16.08■□□□□ 0.16
DDX55-201ENST00000238146 DRAXINQ8NBI3 349 aaPredicted RBP16.08■□□□□ 0.16
DDX55-201ENST00000238146 ZNF778Q96MU6 729 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 NDNQ99608 321 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 APOL6Q9BWW8 343 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 FRMD8Q9BZ67 464 aaPredicted RBP16.08■□□□□ 0.16
DDX55-201ENST00000238146 XYLT2Q9H1B5 865 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 VCX3BQ9H321 246 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 SMYD3Q9H7B4 428 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 VCX3AQ9NNX9 186 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX55-201ENST00000238146 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
DDX55-201ENST00000238146 SRCAPQ6ZRS2 3230 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 SLC15A5A6NIM6 579 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 KCNN4O15554 427 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 MSLNQ13421 630 aaPredicted RBP16.08■□□□□ 0.16
DDX55-201ENST00000238146 RAB6CQ53S08 254 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 RABGAP1LQ5R372 815 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 SH3PXD2AQ5TCZ1 1133 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 FKBP1CQ5VVH2 108 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 POU5F2Q8N7G0 328 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 SLC4A11Q8NBS3 891 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 GMLQ99445 158 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 TCHPQ9BT92 498 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 RAB6CQ9H0N0 254 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 TMEM134Q9H6X4 195 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 ADAMTS6Q9UKP5 1117 aa16.08■□□□□ 0.16
DDX55-201ENST00000238146 CCNT2O60583 730 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 SORBS2O94875 1100 aaKnown RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 APRTP07741 180 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 ETS2P15036 469 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 CHRNA5P30532 468 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 IRX4P78413 519 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 GRM1Q13255 1194 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 MED21Q13503 144 aa16.07■□□□□ 0.16
DDX55-201ENST00000238146 CYP4V2Q6ZWL3 525 aaPredicted RBP16.07■□□□□ 0.16
DDX55-201ENST00000238146 ARCQ7LC44 396 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms