RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 C7orf72A4D263 438 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 I3L4J1 428 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 MSI1O43347 362 aaKnown RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 FAM189A1O60320 539 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 ERBB2P04626 1255 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 PRKCAP17252 672 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 NELFEP18615 380 aaKnown RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 IST1P53990 364 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 GPX6P59796 221 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 TFAP4Q01664 338 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 BST1Q10588 318 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 FOXD4Q12950 439 aaPredicted RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 BOLA3Q53S33 107 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 PPM1LQ5SGD2 360 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 FIBCD1Q8N539 461 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 KBTBD7Q8WVZ9 684 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 ACDQ96AP0 544 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 APOPT1Q96IL0 206 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 EBF4Q9BQW3 602 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.47□□□□□ -0.25
MSH2-201ENST00000233146 HACD3Q9P035 362 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 DNMT3BQ9UBC3 853 aaKnown RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 A0A087WXM4 84 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 SLC22A1O15245 554 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 KLHL2O95198 593 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 STAT3P40763 770 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 ETV3P41162 512 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 SLC18A2Q05940 514 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 DCP2Q8IU60 420 aaKnown RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 ATL1Q8WXF7 558 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 KCNK16Q96T55 309 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 PAFAH2Q99487 392 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 NYXQ9GZU5 481 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 XPNPEP1Q9NQW7 623 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 MRGBPQ9NV56 204 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 TRAF6Q9Y4K3 522 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
MSH2-201ENST00000233146 LAMB2P55268 1798 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 NUP188Q5SRE5 1749 aa13.47□□□□□ -0.25
MSH2-201ENST00000233146 A0A0B4J269 797 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
MSH2-201ENST00000233146 ORC2Q13416 577 aaPredicted RBP13.46□□□□□ -0.25
MSH2-201ENST00000233146 TUBB3Q13509 450 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 ECM1Q16610 540 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 CES4AQ5XG92 561 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 GALNT18Q6P9A2 607 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 SH2D5Q6ZV89 423 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 ANGPTL6Q8NI99 470 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 DCAKDQ8WVC6 231 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 ZNF597Q96LX8 424 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 PKP2Q99959 881 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 SMARCAD1Q9H4L7 1026 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 BARHL2Q9NY43 387 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 DIP2BQ9P265 1576 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.25
MSH2-201ENST00000233146 DNALI1O14645 258 aaPredicted RBP13.46□□□□□ -0.25
MSH2-201ENST00000233146 SLC26A4O43511 780 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 NMT2O60551 498 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 ALX3O95076 343 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 HSPA14Q0VDF9 509 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 ZNF618Q5T7W0 954 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 AGMOQ6ZNB7 445 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 ABTB2Q8N961 1025 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 NEDD1Q8NHV4 660 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 SLC20A1Q8WUM9 679 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 OSCP1Q8WVF1 389 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 GIMAP1Q8WWP7 306 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 CEP95Q96GE4 821 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 C1orf50Q9BV19 199 aa13.46□□□□□ -0.25
MSH2-201ENST00000233146 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
MSH2-201ENST00000233146 ZMAT5Q9UDW3 170 aaKnown RBP13.46□□□□□ -0.25
MSH2-201ENST00000233146 ZSCAN5BA6NJL1 495 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 TMCC2O75069 709 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 S100A5P33763 92 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 PCSK7Q16549 785 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 KRT79Q5XKE5 535 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 RNF19BQ6ZMZ0 732 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 CACTIN-AS1Q8N1I8 211 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 C17orf80Q9BSJ5 609 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 OSBPL11Q9BXB4 747 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 CCDC177Q9NQR7 707 aaPredicted RBP13.46□□□□□ -0.26
MSH2-201ENST00000233146 GINM1Q9NU53 330 aa13.46□□□□□ -0.26
MSH2-201ENST00000233146 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.26
MSH2-201ENST00000233146 CROCCQ5TZA2 2017 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 C1orf232A0A0U1RR37 186 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 PRSS51A0A1B0GVH4 220 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 DENND3A2RUS2 1198 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 POTEMA6NI47 508 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 TSPY2A6NKD2 308 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 IDH3BO43837 385 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms