RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 NEFHP12036 1026 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 RBL1P28749 1068 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 CCDC14Q49A88 953 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 FAXCQ5TGI0 409 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 SLC9A4Q6AI14 798 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 C4orf50Q6ZRC1 276 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 CDHR3Q6ZTQ4 885 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 CAND1Q86VP6 1230 aaKnown RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 EGFL6Q8IUX8 553 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 CTAGE3PQ8IX95 158 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 ARMC2Q8NEN0 867 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 USP6NLQ92738 828 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 NAF1Q96HR8 494 aaKnown RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 PCDH18Q9HCL0 1135 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 GPRC5DQ9NZD1 345 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 LRRC42Q9Y546 428 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 CITO14578 2027 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 BCLAF3A2AJT9 711 aaKnown RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 CXorf49A8MYA2 514 aaPredicted RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 OSBPP22059 807 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 PRKCHP24723 683 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 BCAR1P56945 870 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 TMEM132DQ14C87 1099 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 BOLA3Q53S33 107 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 RFWD3Q6PCD5 774 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 PCDH19Q8TAB3 1148 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 ZNF483Q8TF39 744 aaPredicted RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 TEKT4Q8WW24 435 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 NSL1Q96IY1 281 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 IQCGQ9H095 443 aaKnown RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 KLC2Q9H0B6 622 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 ETNK2Q9NVF9 386 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 ZC3H7BQ9UGR2 993 aaKnown RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 HEY1Q9Y5J3 304 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 PLXNA1Q9UIW2 1896 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 H0Y3Z8 333 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 SKAP2O75563 359 aaPredicted RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 KRT37O76014 449 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 SNRPAP09012 282 aaKnown RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 CCNFP41002 786 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 ZBTB16Q05516 673 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 POU5F1BQ06416 359 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.9■□□□□ 0.3
LTBR-201ENST00000228918 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.9■□□□□ 0.3
LTBR-201ENST00000228918 CPB2Q96IY4 423 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 FAM124BQ9H5Z6 455 aaPredicted RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 NGRNQ9NPE2 291 aaKnown RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 KIAA1257Q9ULG3 409 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 A0A087WZ62 844 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 TRDMT1O14717 391 aaKnown RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 LIN7AO14910 233 aaPredicted RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 LUC7L3O95232 432 aaKnown RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 ZBTB7AO95365 584 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 STAU1O95793 577 aaKnown RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 LMNAP02545 664 aaKnown RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 MYL2P10916 166 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 RGS7P49802 495 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 IGBP1P78318 339 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 KRT72Q14CN4 511 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 GOLGA7BQ2TAP0 167 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 FAM91A1Q658Y4 838 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 SCYL2Q6P3W7 929 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 OLFML1Q6UWY5 402 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 IFNLR1Q8IU57 520 aaPredicted RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 TBCBQ99426 244 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 FDXACB1Q9BRP7 624 aaPredicted RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 SNRNP25Q9BV90 132 aaKnown RBP16.9■□□□□ 0.3
LTBR-201ENST00000228918 NT5C1AQ9BXI3 368 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 RNPEPQ9H4A4 650 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 DCLRE1BQ9H816 532 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 SMYD2Q9NRG4 433 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 ITGA11Q9UKX5 1188 aa16.9■□□□□ 0.3
LTBR-201ENST00000228918 TRIP11Q15643 1979 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 GSC2O15499 205 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 SLC25A27O95847 323 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 CDC25CP30307 473 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 MRPS5P82675 430 aaKnown RBP16.89■□□□□ 0.29
LTBR-201ENST00000228918 CA9Q16790 459 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 TTC39CQ8N584 583 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 C12orf29Q8N999 325 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 FAM172AQ8WUF8 416 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 OXNAD1Q96HP4 312 aaPredicted RBP16.89■□□□□ 0.29
LTBR-201ENST00000228918 PPP1R16BQ96T49 567 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 MKS1Q9NXB0 559 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 PLLPQ9Y342 182 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 DNAJC25-GNG10A0A024R161 153 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 SLC15A5A6NIM6 579 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 IRF6O14896 467 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 RFPL1O75677 317 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 MAP3K6O95382 1288 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 APOEP02649 317 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 APRTP07741 180 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 TXNP10599 105 aaKnown RBP16.89■□□□□ 0.29
LTBR-201ENST00000228918 ARF4P18085 180 aaPredicted RBP16.89■□□□□ 0.29
LTBR-201ENST00000228918 ABL2P42684 1182 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 PTDSS1P48651 473 aaKnown RBP16.89■□□□□ 0.29
LTBR-201ENST00000228918 INHBEP58166 350 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 RBP5P82980 135 aa16.89■□□□□ 0.29
LTBR-201ENST00000228918 BLMHQ13867 455 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms