RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 COQ4Q9Y3A0 265 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 EML5Q05BV3 1969 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 SPAG17Q6Q759 2223 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 MYH10P35580 1976 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 FAM92AA1XBS5 289 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 AP1G2O75843 785 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 SERPINC1P01008 464 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 CYP17A1P05093 508 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 MBL2P11226 248 aaPredicted RBP19.01■□□□□ 0.63
PFN1-201ENST00000225655 OPRD1P41143 372 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 TUBP50607 506 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 GAB4Q2WGN9 574 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 HECTD3Q5T447 861 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 SPOPLQ6IQ16 392 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 SLC2A14Q8TDB8 520 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 ACDQ96AP0 544 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 FAM81BQ96LP2 452 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 NT5C1BQ96P26 610 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 NIF3L1Q9GZT8 377 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 CSNK1G1Q9HCP0 422 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 HMGXB4Q9UGU5 601 aa19.01■□□□□ 0.63
PFN1-201ENST00000225655 CDV3Q9UKY7 258 aaKnown RBP19.01■□□□□ 0.63
PFN1-201ENST00000225655 COCHO43405 550 aa19■□□□□ 0.63
PFN1-201ENST00000225655 RPP40O75818 363 aaKnown RBP19■□□□□ 0.63
PFN1-201ENST00000225655 TPM3P06753 285 aa19■□□□□ 0.63
PFN1-201ENST00000225655 ZDHHC11BP0C7U3 371 aa19■□□□□ 0.63
PFN1-201ENST00000225655 CCDC130P13994 396 aa19■□□□□ 0.63
PFN1-201ENST00000225655 PXNP49023 591 aaPredicted RBP19■□□□□ 0.63
PFN1-201ENST00000225655 COPB1P53618 953 aaKnown RBP19■□□□□ 0.63
PFN1-201ENST00000225655 YWHAEP62258 255 aaKnown RBP19■□□□□ 0.63
PFN1-201ENST00000225655 INCA1Q0VD86 236 aa19■□□□□ 0.63
PFN1-201ENST00000225655 ORC1Q13415 861 aa19■□□□□ 0.63
PFN1-201ENST00000225655 DHCR24Q15392 516 aa19■□□□□ 0.63
PFN1-201ENST00000225655 CSRP2Q16527 193 aa19■□□□□ 0.63
PFN1-201ENST00000225655 EXOC3L4Q17RC7 722 aa19■□□□□ 0.63
PFN1-201ENST00000225655 CACNA2D4Q7Z3S7 1137 aa19■□□□□ 0.63
PFN1-201ENST00000225655 TTC39CQ8N584 583 aa19■□□□□ 0.63
PFN1-201ENST00000225655 ZMIZ2Q8NF64 920 aa19■□□□□ 0.63
PFN1-201ENST00000225655 SMOQ99835 787 aa19■□□□□ 0.63
PFN1-201ENST00000225655 VPS16Q9H269 839 aa19■□□□□ 0.63
PFN1-201ENST00000225655 SEMA4GQ9NTN9 838 aa19■□□□□ 0.63
PFN1-201ENST00000225655 POLR3BQ9NW08 1133 aaPredicted RBP19■□□□□ 0.63
PFN1-201ENST00000225655 TBC1D14Q9P2M4 693 aa19■□□□□ 0.63
PFN1-201ENST00000225655 CHORDC1Q9UHD1 332 aaPredicted RBP19■□□□□ 0.63
PFN1-201ENST00000225655 E2F8A0AVK6 867 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 BEST1O76090 585 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 TBXAS1P24557 533 aaPredicted RBP18.99■□□□□ 0.63
PFN1-201ENST00000225655 C12orf29Q8N999 325 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 RNF214Q8ND24 703 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 EHBP1Q8NDI1 1231 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 LOXL4Q96JB6 756 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 ZFRQ96KR1 1074 aaKnown RBP18.99■□□□□ 0.63
PFN1-201ENST00000225655 HHIPQ96QV1 700 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 INTS2Q9H0H0 1204 aaKnown RBP18.99■□□□□ 0.63
PFN1-201ENST00000225655 FBXO44Q9H4M3 255 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 FAM124BQ9H5Z6 455 aaPredicted RBP18.99■□□□□ 0.63
PFN1-201ENST00000225655 CYP3A43Q9HB55 503 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 APOBEC3GQ9HC16 384 aaKnown RBP18.99■□□□□ 0.63
PFN1-201ENST00000225655 FAM49BQ9NUQ9 324 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 GMIPQ9P107 970 aa18.99■□□□□ 0.63
PFN1-201ENST00000225655 LRRC10BA6NIK2 292 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 LGALS16A8MUM7 142 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 K7EQS6 105 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 FOXD2O60548 495 aaPredicted RBP18.98■□□□□ 0.63
PFN1-201ENST00000225655 APBB3O95704 486 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 ADH1CP00326 375 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 ATP1A3P13637 1013 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 MAP3K7CLP57077 242 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 DMC1Q14565 340 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 MIIPQ5JXC2 388 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 RHBDF2Q6PJF5 856 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 USP33Q8TEY7 942 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 SEMA4DQ92854 862 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 OTUB2Q96DC9 234 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 HNRNPABQ99729 332 aaKnown RBP18.98■□□□□ 0.63
PFN1-201ENST00000225655 CCSER2Q9H7U1 834 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 EBF1Q9UH73 591 aa18.98■□□□□ 0.63
PFN1-201ENST00000225655 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.98■□□□□ 0.63
PFN1-201ENST00000225655 DNAH14Q0VDD8 3507 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 MYOFQ9NZM1 2061 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 MED19A0JLT2 244 aaPredicted RBP18.97■□□□□ 0.63
PFN1-201ENST00000225655 SCAMP3O14828 347 aaKnown RBP18.97■□□□□ 0.63
PFN1-201ENST00000225655 AXIN1O15169 862 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 FAM200BP0CF97 657 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 EIF2DP41214 584 aaKnown RBP18.97■□□□□ 0.63
PFN1-201ENST00000225655 ATXN1P54253 815 aaKnown RBP18.97■□□□□ 0.63
PFN1-201ENST00000225655 UBXN1Q04323 297 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 PRR23CQ6ZRP0 262 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 ZC3H10Q96K80 434 aaKnown RBP18.97■□□□□ 0.63
PFN1-201ENST00000225655 PCMTD1Q96MG8 357 aaPredicted RBP18.97■□□□□ 0.63
PFN1-201ENST00000225655 TWNKQ96RR1 684 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 RTKNQ9BST9 563 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 NT5C1AQ9BXI3 368 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 HSD3B7Q9H2F3 369 aa18.97■□□□□ 0.63
PFN1-201ENST00000225655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■■■□□ 14.7
PFN1-201ENST00000225655 TLR8Q9NR97 1041 aaKnown RBP18.97■□□□□ 0.63
PFN1-201ENST00000225655 CILPO75339 1184 aa18.96■□□□□ 0.63
PFN1-201ENST00000225655 ADH5P11766 374 aa18.96■□□□□ 0.63
PFN1-201ENST00000225655 LRMPQ12912 555 aa18.96■□□□□ 0.63
PFN1-201ENST00000225655 TRIM65Q6PJ69 517 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms