RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 IFI16Q16666 785 aaKnown RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 DCUN1D2Q6PH85 259 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 SLFN11Q7Z7L1 901 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 DEFB106AQ8N104 65 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 EMC1Q8N766 993 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 NIPA2Q8N8Q9 360 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 LRRC57Q8N9N7 239 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 RXFP2Q8WXD0 754 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 CENPIQ92674 756 aaPredicted RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 FBXO32Q969P5 355 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 FAM149B1Q96BN6 582 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 IRX2Q9BZI1 471 aaPredicted RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 ZNF334Q9HCZ1 680 aaPredicted RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 TLR8Q9NR97 1041 aaKnown RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 GMIPQ9P107 970 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 ANAPC7Q9UJX3 599 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 MAGED2Q9UNF1 606 aaPredicted RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 PAXBP1Q9Y5B6 917 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 CAPN6Q9Y6Q1 641 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 CCDC195A0A1B0GUA6 201 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 A0A1W2PQH9 124 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 MACROD2A1Z1Q3 448 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 ZNF840PA6NDX5 716 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 MYO1FO00160 1098 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 CCL16O15467 120 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 LINC01565O15544 149 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 BUB1BO60566 1050 aaPredicted RBP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 ENDOD1O94919 500 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 MOCS3O95396 460 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 PTPN2P17706 415 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 GPD1P21695 349 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 RNASE9P60153 205 aaKnown RBP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 EIF4EBP2Q13542 120 aaPredicted RBP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 CCDC14Q49A88 953 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 PABPC1LQ4VXU2 614 aaKnown RBP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 SYPL2Q5VXT5 272 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 MSANTD2Q6P1R3 559 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 ELMOD1Q8N336 334 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 PGAP3Q96FM1 320 aaPredicted RBP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 BTBD6Q96KE9 485 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 NPY6RQ99463 290 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 SFXN1Q9H9B4 322 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 RRN3Q9NYV6 651 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 DNMT3BQ9UBC3 853 aaKnown RBP14.69□□□□□ -0.06
SEC61B-201ENST00000223641 IP6K2Q9UHH9 426 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 NAALADL1Q9UQQ1 740 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 DOCK6Q96HP0 2047 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 C2orf16Q68DN1 1984 aa14.69□□□□□ -0.06
SEC61B-201ENST00000223641 GRID2IPA4D2P6 1211 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 NCK2O43639 380 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 XYLBO75191 536 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 PROSCO94903 275 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 IGLV3-25P01717 112 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 NCAM1P13591 858 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 PDGFRAP16234 1089 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 HOXB8P17481 243 aaPredicted RBP14.68□□□□□ -0.06
SEC61B-201ENST00000223641 MAN1A1P33908 653 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 TUBP50607 506 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 PIGHQ14442 188 aaPredicted RBP14.68□□□□□ -0.06
SEC61B-201ENST00000223641 TAF12Q16514 161 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 SLC25A52Q3SY17 297 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 DCAF6Q58WW2 860 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 HABP4Q5JVS0 413 aaKnown RBP14.68□□□□□ -0.06
SEC61B-201ENST00000223641 OTUD1Q5VV17 481 aaPredicted RBP14.68□□□□□ -0.06
SEC61B-201ENST00000223641 BTBD8Q5XKL5 378 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 C11orf63Q6NUN7 778 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 ANKRD54Q6NXT1 300 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 KLHDC10Q6PID8 442 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 SYCE2Q6PIF2 218 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 NYAP1Q6ZVC0 841 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 GAREM2Q75VX8 874 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 HS6ST3Q8IZP7 471 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 LEMD2Q8NC56 503 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 UBE2Q2Q8WVN8 375 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 GOLGA1Q92805 767 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 ADAM33Q9BZ11 813 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 IGFLR1Q9H665 355 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 TRPM5Q9NZQ8 1165 aa14.68□□□□□ -0.06
SEC61B-201ENST00000223641 CAPN9O14815 690 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 MOSPD3O75425 235 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 FGF19O95750 216 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 SRGAP2BP0DMP2 458 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 RARGP13631 454 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 GABRR2P28476 465 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 SDC4P31431 198 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 MESDQ14696 234 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 STRADAQ7RTN6 431 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 ARFGAP1Q8N6T3 406 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 TRIM58Q8NG06 486 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 EDEM1Q92611 657 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 CFAP57Q96MR6 1250 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 GAS2L1Q99501 681 aaPredicted RBP14.67□□□□□ -0.06
SEC61B-201ENST00000223641 CORO1BQ9BR76 489 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 ASAH2Q9NR71 780 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 HCFC1R1Q9NWW0 138 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 CLEC1BQ9P126 229 aa14.67□□□□□ -0.06
SEC61B-201ENST00000223641 STAP1Q9ULZ2 295 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms