RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SOX10P56693 466 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 NUP107P57740 925 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 SPARCL1Q14515 664 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 PDK4Q16654 411 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 PLEKHG4Q58EX7 1191 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TMEM63BQ5T3F8 832 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 SYCE1Q8N0S2 351 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 MARVELD2Q8N4S9 558 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 OR7G1Q8NGA0 311 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 CCDC110Q8TBZ0 833 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TRPM4Q8TD43 1214 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 BSNDQ8WZ55 320 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 BTBD9Q96Q07 612 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 SENP7Q9BQF6 1050 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 LIN28AQ9H9Z2 209 aaKnown RBP14.14□□□□□ -0.15
GABPB1-201ENST00000220429 OSGEPQ9NPF4 335 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 AASDHPPTQ9NRN7 309 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TAS2R14Q9NYV8 317 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 GABBR1Q9UBS5 961 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 ACTL7BQ9Y614 415 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 FAM170AA1A519 330 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 PODXLO00592 558 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 STBD1O95210 358 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 SNRPFP62306 86 aaKnown RBP14.14□□□□□ -0.15
GABPB1-201ENST00000220429 ISLR2Q6UXK2 745 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 NEK10Q6ZWH5 1172 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 ACTRT2Q8TDY3 377 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 BORCS5Q969J3 196 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 MAN1C1Q9NR34 630 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 HEY2Q9UBP5 337 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 KLHL3Q9UH77 587 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TBX20Q9UMR3 447 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TLL2Q9Y6L7 1015 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TMEM253P0C7T8 217 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 PTGIRP43119 386 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 C1orf146Q5VVC0 180 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 TMC7Q7Z402 723 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 CBWD2Q8IUF1 395 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 APOBEC3FQ8IUX4 373 aaKnown RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 MAP4K3Q8IVH8 894 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 ICA1LQ8NDH6 482 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 SLC35G2Q8TBE7 412 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 NSUN6Q8TEA1 469 aaKnown RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 KLRG1Q96E93 195 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 DCTN4Q9UJW0 460 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 ZNFX1Q9P2E3 1918 aaKnown RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 AQP9O43315 295 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 PARNO95453 639 aaKnown RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 CD48P09326 243 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 ABCB4P21439 1286 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 TNFAIP3P21580 790 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 PMLP29590 882 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 CDK9P50750 372 aaKnown RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 HIRAP54198 1017 aaPredicted RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 CETN1Q12798 172 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 SF3B4Q15427 424 aaKnown RBP eCLIP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 SIGIRRQ6IA17 410 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 AAGABQ6PD74 315 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 CATSPERGQ6ZRH7 1159 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 GDPD5Q8WTR4 605 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 SLC20A1Q8WUM9 679 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 RFFLQ8WZ73 363 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 ART4Q93070 314 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 C18orf8Q96DM3 657 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 ARHGEF26Q96DR7 871 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 UNKQ9C0B0 810 aaKnown RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 PAIP1Q9H074 479 aaKnown RBP14.13□□□□□ -0.15
GABPB1-201ENST00000220429 LGALS13Q9UHV8 139 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 NAALADL1Q9UQQ1 740 aa14.13□□□□□ -0.15
GABPB1-201ENST00000220429 WDR90Q96KV7 1748 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 C19orf81C9J6K1 198 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 KMOO15229 486 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 TNFAIP8O95379 198 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 MSL3P1P0C860 447 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 MCCD1P59942 119 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-201ENST00000220429 KCNC4Q03721 635 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 DMP1Q13316 513 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-201ENST00000220429 ATP1A4Q13733 1029 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 TLR1Q15399 786 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 SNRNP35Q16560 246 aaKnown RBP14.12□□□□□ -0.15
GABPB1-201ENST00000220429 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 RHOT2Q8IXI1 618 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 CHPT1Q8WUD6 406 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 KAT5Q92993 513 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 CEP170P1Q96L14 293 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 AGPAT1Q99943 283 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 OSBPL8Q9BZF1 889 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 SIAEQ9HAT2 523 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 S100A14Q9HCY8 104 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 SEPT11Q9NVA2 429 aaKnown RBP14.12□□□□□ -0.15
GABPB1-201ENST00000220429 HOXC10Q9NYD6 342 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 AMFRQ9UKV5 643 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 SATB2Q9UPW6 733 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 SSC5DA1L4H1 1573 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 ATMINO43313 823 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-201ENST00000220429 STAM2O75886 525 aa14.12□□□□□ -0.15
GABPB1-201ENST00000220429 ENO2P09104 434 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-201ENST00000220429 PRKACBP22694 351 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms