RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PIGZQ86VD9 579 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 FAM71AQ8IYT1 594 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 GRAMD1AQ96CP6 724 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 ATXN3LQ9H3M9 355 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 FBXO44Q9H4M3 255 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 DMAC2Q9NW81 257 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 ZFP69BQ9UJL9 534 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 KRT14P02533 472 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 SLC2A3P11169 496 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CENPUQ71F23 418 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CDKL3Q8IVW4 592 aaPredicted RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 LRRC37BQ96QE4 947 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 MUC3BQ9H195 1237 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ETNK1Q9HBU6 452 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 GEMIN8Q9NWZ8 242 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ZMYM2Q9UBW7 1377 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 EFCAB14O75071 495 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CYBAP13498 195 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 PBX3P40426 434 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 MDH1P40925 334 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 MARSP56192 900 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 RAD51Q06609 339 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 TARBP2Q15633 366 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 SDHAF4Q5VUM1 108 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ANKS3Q6ZW76 656 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 THOC1Q96FV9 657 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 TSEN34Q9BSV6 310 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 IQANK1A0A1B0GTG1 560 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CLDN5O00501 218 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 C4BPAP04003 597 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 PPM1AP35813 382 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ARSEP51690 589 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 SMAD1Q15797 465 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 PSMD5Q16401 504 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 WDR59Q6PJI9 974 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CCDC33Q8N5R6 958 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 APBB2Q92870 758 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 IFT43Q96FT9 208 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 KREMEN1Q96MU8 473 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 MRPL45Q9BRJ2 306 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CERS4Q9HA82 394 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 TAS2R14Q9NYV8 317 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 LMCD1Q9NZU5 365 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 GSTA1P08263 222 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 GSTA2P09210 222 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CKBP12277 381 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 PPARGP37231 505 aaPredicted RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 DEFB106AQ8N104 65 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 TEX9Q8N6V9 391 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ATP6V0D2Q8N8Y2 350 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ATL2Q8NHH9 583 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ZNF473Q8WTR7 871 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 TRIM56Q9BRZ2 755 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 SEZ6LQ9BYH1 1024 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 SAYSD1Q9NPB0 183 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 TLR8Q9NR97 1041 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CACNG4Q9UBN1 327 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CDH9Q9ULB4 789 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 HAUS5O94927 633 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 NPR3P17342 541 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 INPP1P49441 399 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 PMS2P54278 862 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 LILRA4P59901 499 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 AP2B1P63010 937 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 MTM1Q13496 603 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 THOC5Q13769 683 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 PKN2Q16513 984 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 DENND5BQ6ZUT9 1274 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 NUDT18Q6ZVK8 323 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 RBM23Q86U06 439 aaKnown RBP9.76□□□□□ -0.85
CCDC113-201ENST00000219299 ITIH5Q86UX2 942 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 BAP1Q92560 729 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 CFAP36Q96G28 342 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 TTPALQ9BTX7 342 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 SPG21Q9NZD8 308 aa9.76□□□□□ -0.85
CCDC113-201ENST00000219299 MYO7AQ13402 2215 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 TTI1O43156 1089 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 PROSCO94903 275 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 OR4Q2P0C623 313 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ZNF268Q14587 947 aaPredicted RBP9.75□□□□□ -0.85
CCDC113-201ENST00000219299 SLFN11Q7Z7L1 901 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ATPAF2Q8N5M1 289 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ATAD1Q8NBU5 361 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 MAML1Q92585 1016 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 RMDN1Q96DB5 314 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 NUDCD1Q96RS6 583 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 USP18Q9UMW8 372 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 MRPL42Q9Y6G3 142 aaKnown RBP9.75□□□□□ -0.85
CCDC113-201ENST00000219299 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 DNM1LO00429 736 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CXCL14O95715 111 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 APRTP07741 180 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 PMLP29590 882 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CAV1Q03135 178 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ART3Q13508 389 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 IRF5Q13568 498 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 NFIL3Q16649 462 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 PPM1LQ5SGD2 360 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms