RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 TFAP2BQ92481 460 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 C18orf8Q96DM3 657 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 UROC1Q96N76 676 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 ZMYND15Q9H091 742 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 PIDD1Q9HB75 910 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNU13-201ENST00000215956 PCDHA3Q9Y5H8 950 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 NUMBLQ9Y6R0 609 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 CHD8Q9HCK8 2581 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 A8MXQ7 604 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 ANHXE9PGG2 379 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 PAPLNO95428 1278 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 RHOXF2BP0C7M4 288 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 WARSP23381 471 aaKnown RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 SLC8A3P57103 927 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 LONRF2Q1L5Z9 754 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 FBXO38Q6PIJ6 1188 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 TAS1R1Q7RTX1 841 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 RHOT1Q8IXI2 618 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 RNF168Q8IYW5 571 aaPredicted RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 TMEM86AQ8N2M4 240 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 GOLPH3Q9H4A6 298 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 SLITRK6Q9H5Y7 841 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 ARFGAP3Q9NP61 516 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 NCDNQ9UBB6 729 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 COL4A3Q01955 1670 aa12.83□□□□□ -0.35
SNU13-201ENST00000215956 KRIT1O00522 736 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 SPTLC1O15269 473 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 CALCAP01258 141 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 SPATA31D3P0C874 917 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 GNL1P36915 607 aaPredicted RBP12.83□□□□□ -0.36
SNU13-201ENST00000215956 GABRB2P47870 512 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 STARD6P59095 220 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 GRIK3Q13003 919 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 ACAP1Q15027 740 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 ZNF528Q3MIS6 628 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
SNU13-201ENST00000215956 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 SCARA3Q6AZY7 606 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 DENND1BQ6P3S1 775 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 SPATA31D4Q6ZUB0 917 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 ZDHHC17Q8IUH5 632 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 CRYBG2Q8N1P7 616 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 ST13P5Q8NFI4 369 aaPredicted RBP12.83□□□□□ -0.36
SNU13-201ENST00000215956 FNIP1Q8TF40 1166 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 STK32AQ8WU08 396 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 CD101Q93033 1021 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 SHDQ96IW2 340 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 NCAPGQ9BPX3 1015 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 ANKZF1Q9H8Y5 726 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 ZDHHC7Q9NXF8 308 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 TMEM59LQ9UK28 342 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 ANK1P16157 1881 aa12.83□□□□□ -0.36
SNU13-201ENST00000215956 SIGLEC16A6NMB1 481 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 PTGESO14684 152 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 EFEMP2O95967 443 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 SDHBP21912 280 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 MLH1P40692 756 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 ACADSBP45954 432 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 OR1G1P47890 313 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 LHX1P48742 406 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 DSG1Q02413 1049 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 LRRC38Q5VT99 294 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 LIMS2Q7Z4I7 341 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 MAATS1Q7Z4T9 603 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 COLGALT2Q8IYK4 626 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 MS4A14Q96JA4 679 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 TWNKQ96RR1 684 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 GAD1Q99259 594 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 MRPL45Q9BRJ2 306 aaKnown RBP12.82□□□□□ -0.36
SNU13-201ENST00000215956 SPATA6Q9NWH7 488 aaPredicted RBP12.82□□□□□ -0.36
SNU13-201ENST00000215956 TSPAN16Q9UKR8 245 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 DSEQ9UL01 958 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 CACNA1GO43497 2377 aa12.82□□□□□ -0.36
SNU13-201ENST00000215956 TMEM191CA6NGB0 347 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 ARL5CA6NH57 179 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 PODXLO00592 558 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 TGM5O43548 720 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 FGGP02679 453 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 KRT3P12035 628 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 GPD2P43304 727 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 CLCN6P51797 869 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
SNU13-201ENST00000215956 BCAT1P54687 386 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 LILRA4P59901 499 aa12.81□□□□□ -0.36
SNU13-201ENST00000215956 PSMC1P62191 440 aaKnown RBP12.81□□□□□ -0.36
SNU13-201ENST00000215956 PDCLQ13371 301 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms