RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 FBXL16Q8N461 479 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 WHRNQ9P202 907 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 SAE1Q9UBE0 346 aaPredicted RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 TBKBP1A7MCY6 615 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 MICAL2O94851 1124 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 FAM153BP0C7A2 387 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 FAM153CQ494X1 144 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 AGAP9Q5VTM2 703 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 C16orf89Q6UX73 402 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 ILDR2Q71H61 639 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 PRUNE1Q86TP1 453 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 MIER2Q8N344 545 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 FAM153AQ9UHL3 310 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 FRMPD4Q14CM0 1322 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 ERI2A8K979 691 aaKnown RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 LSM8O95777 96 aaKnown RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 CCDC130P13994 396 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 SSTR1P30872 391 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 LRRC23Q53EV4 343 aaPredicted RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 FRMD8Q9BZ67 464 aaPredicted RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 RIMS1Q86UR5 1692 aaKnown RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 PREX1Q8TCU6 1659 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 ACKR2O00590 384 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 IRF6O14896 467 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 RHOCP08134 193 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 UBTFL6P0CB48 400 aaPredicted RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 OCM2P0CE71 109 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 OCMP0CE72 109 aaPredicted RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 ITGB6P18564 788 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 RHOAP61586 193 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 TMEM132BQ14DG7 1078 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 FAM171A1Q5VUB5 890 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 NT5DC3Q86UY8 548 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 CACUL1Q86Y37 369 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 CXCL11O14625 94 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 LZTS3O60299 673 aaPredicted RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 RARAP10276 462 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 H2AFXP16104 143 aaPredicted RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 BGNP21810 368 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 SHROOM1Q2M3G4 852 aaPredicted RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 ZNF280DQ6N043 979 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 HAS1Q92839 578 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 MTMR9Q96QG7 549 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 IQGAP1P46940 1657 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 USP12O75317 370 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 MYL4P12829 197 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 UBA1P22314 1058 aaKnown RBP19.43■□□□□ 0.7
MBD3-201ENST00000156825 RFX3P48380 749 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 ERVK-9P63128 1117 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 SLC27A1Q6PCB7 646 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 GAD1Q99259 594 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 NEUROG2Q9H2A3 272 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 ABHD16BQ9H3Z7 469 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 TAS2R14Q9NYV8 317 aa19.43■□□□□ 0.7
MBD3-201ENST00000156825 E9PBE3 544 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 KLHL41O60662 606 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 BLVRAP53004 296 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 UBE3AQ05086 875 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 MFSD10Q14728 455 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 ARRDC4Q8NCT1 418 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 B4GALNT2Q8NHY0 566 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 SEPT8Q92599 483 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 PPP1R2P1Q96PQ5 205 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 TMBIM4Q9HC24 238 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 SLC40A1Q9NP59 571 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 RIC8BQ9NVN3 520 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 DNAJC16Q9Y2G8 782 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 F8VP50 259 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 GLRA3O75311 464 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 ELK3P41970 407 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 COPAP53621 1224 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 AQP5P55064 265 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 KDM7AQ6ZMT4 941 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 OTUB1Q96FW1 271 aaPredicted RBP19.42■□□□□ 0.7
MBD3-201ENST00000156825 SCUBE2Q9NQ36 999 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 LRRC4BQ9NT99 713 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 SLC25A13Q9UJS0 675 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 SLIT1O75093 1534 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
MBD3-201ENST00000156825 NT5DC1Q5TFE4 455 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 UNC45BQ8IWX7 931 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 IL31RAQ8NI17 732 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 AAASQ9NRG9 546 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 ITGA11Q9UKX5 1188 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 MCL1Q07820 350 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 MPP3Q13368 585 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 WDR59Q6PJI9 974 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 DEFB106AQ8N104 65 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 JADE3Q92613 823 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 PDGFDQ9GZP0 370 aaPredicted RBP19.42■□□□□ 0.7
MBD3-201ENST00000156825 XPNPEP3Q9NQH7 507 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 PSD3Q9NYI0 1048 aa19.42■□□□□ 0.7
MBD3-201ENST00000156825 H7C4K7 107 aa19.41■□□□□ 0.7
MBD3-201ENST00000156825 BFSP2Q13515 415 aa19.41■□□□□ 0.7
MBD3-201ENST00000156825 TBC1D19Q8N5T2 526 aa19.41■□□□□ 0.7
MBD3-201ENST00000156825 SAMD3Q8N6K7 520 aa19.41■□□□□ 0.7
MBD3-201ENST00000156825 CNDP1Q96KN2 507 aa19.41■□□□□ 0.7
MBD3-201ENST00000156825 ECSITQ9BQ95 431 aa19.41■□□□□ 0.7
MBD3-201ENST00000156825 NAALADL1Q9UQQ1 740 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms