RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 EIF3HO15372 352 aaKnown RBP eCLIP23.02■■□□□ 1.28
HOXC8-201ENST00000040584 PSMA2P25787 234 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 CTNNB1P35222 781 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 FLT3P36888 993 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 BMPR1AP36894 532 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 MRPS5P82675 430 aaKnown RBP23.02■■□□□ 1.28
HOXC8-201ENST00000040584 HLTFQ14527 1009 aaKnown RBP eCLIP23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SDHAF4Q5VUM1 108 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 VSTM1Q6UX27 236 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SPRED2Q7Z698 418 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 NIPA2Q8N8Q9 360 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.02■■□□□ 1.28
HOXC8-201ENST00000040584 ALG3Q92685 438 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 KRT35Q92764 455 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 ESYT3A0FGR9 886 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SOAT2O75908 522 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 ARHGEF15O94989 841 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 USP17L7P0C7H9 530 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 CTNNA1P35221 906 aaKnown RBP23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SCNN1AP37088 669 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SMARCB1Q12824 385 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 DUSP4Q13115 394 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 TTMPQ5BVD1 217 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SPDYCQ5MJ68 293 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 KDM7AQ6ZMT4 941 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SLC26A9Q7LBE3 791 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SCAMP5Q8TAC9 235 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 RXFP2Q8WXD0 754 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 SEC14L1Q92503 715 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 PNPLA8Q9NP80 782 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 MRPL17Q9NRX2 175 aaKnown RBP23.02■■□□□ 1.28
HOXC8-201ENST00000040584 RSPH14Q9UHP6 348 aa23.02■■□□□ 1.28
HOXC8-201ENST00000040584 UTP11Q9Y3A2 253 aaKnown RBP23.02■■□□□ 1.28
HOXC8-201ENST00000040584 C2CD4BA6NLJ0 364 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 MYO1CO00159 1063 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 CTNNA2P26232 953 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 MAGEA11P43364 429 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 MARCKSL1P49006 195 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 PEX5P50542 639 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 PIGHQ14442 188 aaPredicted RBP23.01■■□□□ 1.27
HOXC8-201ENST00000040584 ARFGAP2Q8N6H7 521 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 STKLD1Q8NE28 680 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 SPPL2BQ8TCT7 592 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 ARL8AQ96BM9 186 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 C17orf80Q9BSJ5 609 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 RAB17Q9H0T7 212 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 CNGB3Q9NQW8 809 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 PCDHA3Q9Y5H8 950 aa23.01■■□□□ 1.27
HOXC8-201ENST00000040584 GOLGA6L10A0A0M3HER8 536 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 ZSCAN5CA6NGD5 496 aaPredicted RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 SRRM3A6NNA2 597 aaPredicted RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 FBXO21O94952 628 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 PDGFRAP16234 1089 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 GPD1P21695 349 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 MGAT5BQ3V5L5 792 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 EFHC1Q5JVL4 640 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 DCAF12L1Q5VU92 463 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 UBL4BQ8N7F7 174 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 SEPT5Q99719 369 aaPredicted RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 ZBP1Q9H171 429 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 ALG13Q9NP73 1137 aaKnown RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 TNFRSF10BO14763 440 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 TRIM66O15016 1216 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 ZBED1O96006 694 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 ZNF143P52747 638 aaPredicted RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 SLC5A3P53794 718 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 DAOAP59103 153 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 GNGT1P63211 74 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 IFRD2Q12894 506 aaPredicted RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 C2orf15Q8WU43 125 aaKnown RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 FAM149B1Q96BN6 582 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 ATP6V1G3Q96LB4 118 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 C8orf48Q96LL4 319 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 UBE2OQ9C0C9 1292 aaKnown RBP23■■□□□ 1.27
HOXC8-201ENST00000040584 STK39Q9UEW8 545 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 MTUS1Q9ULD2 1270 aa23■■□□□ 1.27
HOXC8-201ENST00000040584 LILRB3O75022 631 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 CTSAP10619 480 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 HAPLN1P10915 354 aaPredicted RBP22.99■■□□□ 1.27
HOXC8-201ENST00000040584 CA8P35219 290 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 SSR1P43307 286 aaKnown RBP22.99■■□□□ 1.27
HOXC8-201ENST00000040584 HFE2Q6ZVN8 426 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 ARCQ7LC44 396 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 GPR152Q8TDT2 470 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 CFAP57Q96MR6 1250 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 AP1M1Q9BXS5 423 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 PLXNA4Q9HCM2 1894 aa22.99■■□□□ 1.27
HOXC8-201ENST00000040584 YJEFN3A6XGL0 299 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 E7ENQ6 273 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 CSPG5O95196 566 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 CA3P07451 260 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 TCF4P15884 667 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 TAS2R40P59535 323 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 C15orf59Q2T9L4 293 aaPredicted RBP22.98■■□□□ 1.27
HOXC8-201ENST00000040584 CCDC14Q49A88 953 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 ZNF461Q8TAF7 563 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 USP3Q9Y6I4 520 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 FAM187AA6NFU0 413 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 EBAG9O00559 213 aa22.98■■□□□ 1.27
HOXC8-201ENST00000040584 ABLIM3O94929 683 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms