RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ARID3BQ8IVW6 561 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 RAB3IL1Q8TBN0 382 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 TMEM40Q8WWA1 233 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 SENP8Q96LD8 212 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 TWNKQ96RR1 684 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHPF2-201ENST00000035307 NINJ2Q9NZG7 142 aa12.53□□□□□ -0.4
CHPF2-201ENST00000035307 DOCK3Q8IZD9 2030 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 SOCS7O14512 581 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 USP12O75317 370 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 LMO2P25791 158 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 CDC25CP30307 473 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 SCTRP47872 440 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 CRADDP78560 199 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 MRPS6P82932 125 aaKnown RBP12.52□□□□□ -0.4
CHPF2-201ENST00000035307 TSTA3Q13630 321 aaPredicted RBP12.52□□□□□ -0.4
CHPF2-201ENST00000035307 EFHC2Q5JST6 749 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 TTC27Q6P3X3 843 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.45e-25■■■■■ 523.4
CHPF2-201ENST00000035307 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 SLC24A3Q9HC58 644 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 L3MBTL1Q9Y468 752 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 MYH15Q9Y2K3 1946 aa12.52□□□□□ -0.4
CHPF2-201ENST00000035307 URB1O60287 2271 aaKnown RBP12.52□□□□□ -0.41
CHPF2-201ENST00000035307 M0QYT0 321 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 ASS1P00966 412 aaKnown RBP12.52□□□□□ -0.41
CHPF2-201ENST00000035307 CD4P01730 458 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 GRAMD1BQ3KR37 738 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 DCAF4L1Q3SXM0 396 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 JOSD2Q8TAC2 188 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 TMEM237Q96Q45 408 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 RSAD1Q9HA92 442 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 DDIT4Q9NX09 232 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 GOLGA8TH3BQL2 631 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 KCNK1O00180 336 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 ITGBL1O95965 494 aaPredicted RBP12.52□□□□□ -0.41
CHPF2-201ENST00000035307 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 NRLP54845 237 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 GCNT1Q02742 428 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.41
CHPF2-201ENST00000035307 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 FAM171A1Q5VUB5 890 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 TMCO2Q7Z6W1 182 aaPredicted RBP12.52□□□□□ -0.41
CHPF2-201ENST00000035307 FAM129AQ9BZQ8 928 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 CXCL16Q9H2A7 254 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 SUDS3Q9H7L9 328 aaPredicted RBP12.52□□□□□ -0.41
CHPF2-201ENST00000035307 TRPC7Q9HCX4 862 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 SLC27A5Q9Y2P5 690 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 TRPV2Q9Y5S1 764 aa12.52□□□□□ -0.41
CHPF2-201ENST00000035307 DCTN3O75935 186 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 SPATA31D3P0C874 917 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 SNRPFP62306 86 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 MYBPC2Q14324 1141 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 PRPSAP1Q14558 356 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 ASTE1Q2TB18 679 aaPredicted RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 SPATA31D4Q6ZUB0 917 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 ARRDC4Q8NCT1 418 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 NTPCRQ9BSD7 190 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 FAM105AQ9NUU6 356 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 PCDHB7Q9Y5E2 793 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 EVPLQ92817 2033 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 ENDOD1O94919 500 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 AFF1P51825 1210 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 MAMLD1Q13495 774 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 SV2CQ496J9 727 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 CYB5D1Q6P9G0 228 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 CRELD2Q6UXH1 353 aaPredicted RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 WDR75Q8IWA0 830 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 ST13P5Q8NFI4 369 aaPredicted RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 FSD1LQ9BXM9 530 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 SLCO1B3Q9NPD5 702 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 GTSE1Q9NYZ3 720 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 NOP53Q9NZM5 478 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 PHTF1Q9UMS5 762 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 KIAA1551Q9HCM1 1747 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 CNTNAP2Q9UHC6 1331 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 FKTNO75072 461 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 DUSP11O75319 330 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 USP17L7P0C7H9 530 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 FAM200BP0CF97 657 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 MIPP30301 263 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 TPI1P60174 286 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 B3GNT9Q6UX72 402 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 PPWD1Q96BP3 646 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 PAFAH2Q99487 392 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 TMEM106CQ9BVX2 250 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 BFARQ9NZS9 450 aa12.51□□□□□ -0.41
CHPF2-201ENST00000035307 CPSF2Q9P2I0 782 aaKnown RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 BARX2Q9UMQ3 279 aaPredicted RBP12.51□□□□□ -0.41
CHPF2-201ENST00000035307 ARAP2Q8WZ64 1704 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms