RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 WBP2Q969T9 261 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CYFIP2Q96F07 1278 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CNTNAP3BQ96NU0 1288 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 TWNKQ96RR1 684 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 NT5C1AQ9BXI3 368 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CNTNAP3Q9BZ76 1288 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 IMPG2Q9BZV3 1241 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 MARK1Q9P0L2 795 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 PCDHA5Q9Y5H7 936 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CACNA1EQ15878 2313 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 USP24Q9UPU5 2620 aa16.77■□□□□ 0.27
ERCC1-201ENST00000013807 KLF8O95600 359 aaPredicted RBP16.76■□□□□ 0.27
ERCC1-201ENST00000013807 P2RY2P41231 377 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 PIK3CAP42336 1068 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 PSEN1P49768 467 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 ADAM9Q13443 819 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 EMC10Q5UCC4 262 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 BTBD8Q5XKL5 378 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 ANO7Q6IWH7 933 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 NUDT18Q6ZVK8 323 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 TMEM25Q86YD3 366 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 FAM186BQ8IYM0 893 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 TPSD1Q9BZJ3 242 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 POLMQ9NP87 494 aaPredicted RBP16.76■□□□□ 0.27
ERCC1-201ENST00000013807 FAM49BQ9NUQ9 324 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 OSER1Q9NX31 292 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 DEC1Q9P2X7 70 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 USP3Q9Y6I4 520 aa16.76■□□□□ 0.27
ERCC1-201ENST00000013807 SCAMP3O14828 347 aaKnown RBP16.75■□□□□ 0.27
ERCC1-201ENST00000013807 CACNG3O60359 315 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 ZNF202O95125 648 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 KRT13P13646 458 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 TIE1P35590 1138 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 GCLMP48507 274 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 KIF11P52732 1056 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 CREB5Q02930 508 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 ORC1Q13415 861 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 KRT39Q6A163 491 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 GPRIN1Q7Z2K8 1008 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 TRMT11Q7Z4G4 463 aaKnown RBP16.75■□□□□ 0.27
ERCC1-201ENST00000013807 TTC39CQ8N584 583 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 TERB1Q8NA31 727 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 CHAMP1Q96JM3 812 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 DUSP16Q9BY84 665 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 UBXN6Q9BZV1 441 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 NIF3L1Q9GZT8 377 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.75■□□□□ 0.27
ERCC1-201ENST00000013807 HCN2Q9UL51 889 aa16.75■□□□□ 0.27
ERCC1-201ENST00000013807 TBC1D3BA6NDS4 549 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 TBX18O95935 607 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 TRIM49P0CI25 452 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 TRIM49CP0CI26 452 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 BCKDHBP21953 392 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 GBP1P32455 592 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 PLA2G4AP47712 749 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 SHC2P98077 582 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 BYSLQ13895 437 aaKnown RBP16.74■□□□□ 0.27
ERCC1-201ENST00000013807 MAP7D1Q3KQU3 841 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 COBLL1Q53SF7 1204 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 RNF43Q68DV7 783 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 Q6ZNB5 142 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 CCDC186Q7Z3E2 898 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 DNAI2Q9GZS0 605 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 SMOC1Q9H4F8 434 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 CD248Q9HCU0 757 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 CLIC5Q9NZA1 410 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 WDR35Q9P2L0 1181 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 EVLQ9UI08 416 aaPredicted RBP16.74■□□□□ 0.27
ERCC1-201ENST00000013807 FBXO10Q9UK96 956 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 MAPK8IP1Q9UQF2 711 aa16.74■□□□□ 0.27
ERCC1-201ENST00000013807 LNP1A1A4G5 178 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 ACO1P21399 889 aaKnown RBP16.73■□□□□ 0.27
ERCC1-201ENST00000013807 ADORA2BP29275 332 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 PMLP29590 882 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 TCEAL6Q6IPX3 200 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 ZNF513Q8N8E2 541 aaPredicted RBP16.73■□□□□ 0.27
ERCC1-201ENST00000013807 NAT16Q8N8M0 369 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 TCEAL3Q969E4 200 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 NACA2Q9H009 215 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 GOLPH3LQ9H4A5 285 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 NMUR1Q9HB89 426 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 INVSQ9Y283 1065 aa16.73■□□□□ 0.27
ERCC1-201ENST00000013807 ADAMTS9Q9P2N4 1935 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 CKAP5Q14008 2032 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 KHNYNO15037 678 aaKnown RBP16.72■□□□□ 0.27
ERCC1-201ENST00000013807 CYP26A1O43174 497 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 CLSTN1O94985 981 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 KCNK5O95279 499 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 CISD3P0C7P0 127 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 RARGP13631 454 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 NTSR1P30989 418 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 DPP6P42658 865 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 KDSRQ06136 332 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 ANO4Q32M45 955 aa16.72■□□□□ 0.27
ERCC1-201ENST00000013807 PPP1R26Q5T8A7 1209 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-201ENST00000013807 N4BP2L1Q5TBK1 243 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms