RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 TRIP10Q15642 601 aa20.43■□□□□ 0.86
HOXA11-201ENST00000006015 APBB2Q92870 758 aa20.43■□□□□ 0.86
HOXA11-201ENST00000006015 SIKE1Q9BRV8 207 aa20.43■□□□□ 0.86
HOXA11-201ENST00000006015 MKS1Q9NXB0 559 aa20.43■□□□□ 0.86
HOXA11-201ENST00000006015 MARCOQ9UEW3 520 aaPredicted RBP20.43■□□□□ 0.86
HOXA11-201ENST00000006015 EFR3BQ9Y2G0 817 aa20.43■□□□□ 0.86
HOXA11-201ENST00000006015 F8VP50 259 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 STRNO43815 780 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 KRT37O76014 449 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 KITP10721 976 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 KCNA2P16389 499 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 RPS12P25398 132 aaKnown RBP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 MTM1Q13496 603 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 TXNRD3NBQ6F5E7 133 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 RBM44Q6ZP01 1051 aaKnown RBP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 NUDCD3Q8IVD9 361 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 SMYD3Q9H7B4 428 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 ANKEF1Q9NU02 776 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 AGTPBP1Q9UPW5 1226 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 ZNF510Q9Y2H8 683 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 PCDHB4Q9Y5E5 795 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 CCDC195A0A1B0GUA6 201 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 SNNO75324 88 aaPredicted RBP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 SNRPAP09012 282 aaKnown RBP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 MMP8P22894 467 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 SSTR3P32745 418 aaPredicted RBP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 CLCN2P51788 898 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 YWHAGP61981 247 aaKnown RBP eCLIP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 SLC25A3Q00325 362 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 FOLH1Q04609 750 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 FSTL1Q12841 308 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 SFSWAPQ12872 951 aaKnown RBP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 FBXL19Q6PCT2 694 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 IGDCC3Q8IVU1 814 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 CCDC60Q8IWA6 550 aaPredicted RBP20.42■□□□□ 0.86
HOXA11-201ENST00000006015 ALDH16A1Q8IZ83 802 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 MARVELD2Q8N4S9 558 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 MCEEQ96PE7 176 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 TIMMDC1Q9NPL8 285 aa20.42■□□□□ 0.86
HOXA11-201ENST00000006015 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 STBD1O95210 358 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 HLA-DRAP01903 254 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 CALB1P05937 261 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 WEE2P0C1S8 567 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 DYNLT1P63172 113 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 BTKQ06187 659 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 TBL3Q12788 808 aaKnown RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 NCOA4Q13772 614 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 PIGHQ14442 188 aaPredicted RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 HSP90AA5PQ58FG0 334 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 CES4AQ5XG92 561 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 OLFML2BQ68BL8 750 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 DNAJC24Q6P3W2 148 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 TMEM270Q6UE05 265 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 SHKBP1Q8TBC3 707 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 TRPM4Q8TD43 1214 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 PPP1R14BQ96C90 147 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 ZFRQ96KR1 1074 aaKnown RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 USP29Q9HBJ7 922 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 PNPLA8Q9NP80 782 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 RHBDL2Q9NX52 303 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 PLK2Q9NYY3 685 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 SF3B1O75533 1304 aaKnown RBP eCLIP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 TPP2P29144 1249 aaPredicted RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 COPAP53621 1224 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 BASP1P80723 227 aaKnown RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 MRPS5P82675 430 aaKnown RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 CUL2Q13617 745 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 PGM2L1Q6PCE3 622 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 C1orf228Q6PIY5 440 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 POLNQ7Z5Q5 900 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 TAB3Q8N5C8 712 aaPredicted RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 MAML3Q96JK9 1138 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 C10orf88Q9H8K7 445 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 SEPT9Q9UHD8 586 aaPredicted RBP20.41■□□□□ 0.86
HOXA11-201ENST00000006015 ZNF180Q9UJW8 692 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 MAD1L1Q9Y6D9 718 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 TEX264Q9Y6I9 313 aa20.41■□□□□ 0.86
HOXA11-201ENST00000006015 A0A0J9YVX5 310 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 KLHL2O95198 593 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 CLPTM1O96005 669 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 SP2Q02086 613 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 SULT2A1Q06520 285 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 LGSNQ5TDP6 509 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 DCAF15Q66K64 600 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 DCUN1D2Q6PH85 259 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 KLHDC10Q6PID8 442 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 BBS12Q6ZW61 710 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 ACTRT2Q8TDY3 377 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 NSUN6Q8TEA1 469 aaKnown RBP20.4■□□□□ 0.86
HOXA11-201ENST00000006015 ZNF516Q92618 1163 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 DNAJC1Q96KC8 554 aaKnown RBP20.4■□□□□ 0.86
HOXA11-201ENST00000006015 Q9H521 79 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 STN1Q9H668 368 aaKnown RBP20.4■□□□□ 0.86
HOXA11-201ENST00000006015 SAE1Q9UBE0 346 aaPredicted RBP20.4■□□□□ 0.86
HOXA11-201ENST00000006015 ITGA11Q9UKX5 1188 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 DOCK5Q9H7D0 1870 aa20.4■□□□□ 0.86
HOXA11-201ENST00000006015 C3orf70A6NLC5 250 aaPredicted RBP20.39■□□□□ 0.86
HOXA11-201ENST00000006015 BIRC5O15392 142 aa20.39■□□□□ 0.86
HOXA11-201ENST00000006015 RAG1P15918 1043 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms