RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Mettl21cQ8BLU2 248 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Trip10Q8CJ53 603 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Wdr98Q8VC42 657 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Olfr449Q8VGW8 311 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm3404Q9D506 307 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ubxn11Q9D572 484 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Rnf138rt1Q9D9M9 248 aa13.39□□□□□ -0.27
Nup88-203ENSMUST00000108531 Foxn1Q61575 648 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Txndc8Q69AB2 127 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fbxo44Q8BK26 255 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Rmnd1Q8CI78 450 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gga1Q8R0H9 635 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Abhd8Q8R0P8 439 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Snrnp25Q8VIK1 123 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Paip2Q9D6V8 124 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zfyve19Q9DAZ9 389 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Kat2aQ9JHD2 830 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Chrac1Q9JKP8 129 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Bace2Q9JL18 514 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Cyp2t4E9PWV0 503 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm17535J3KMR8 224 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fam71e2L7N480 754 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fgl2P12804 432 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 SnnP61807 88 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 NyxP83503 476 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Trappc3lQ4KL14 181 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Cage1Q5IR70 849 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Hmgb4Q6P8W9 181 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Scaf4Q6PFF0 1209 aaKnown RBP13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Olfr392Q7TRX6 312 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ppp1r12bQ8BG95 976 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Hdac7Q8C2B3 938 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ccdc159Q8C963 411 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tfb1mQ8JZM0 345 aaKnown RBP13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ier5lQ99J55 406 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ogfod2Q9CQ04 349 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Krt7Q9DCV7 457 aa13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 PhipQ8VDD9 1821 aaKnown RBP13.38□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ccnyl1D3YUJ3 367 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Abhd12bG3UZN6 359 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 MycnP03966 462 aaKnown RBP13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gnl1P36916 607 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Atp5bP56480 529 aaKnown RBP13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Irf6P97431 467 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fam172aQ3TNH5 417 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Srrm1Q52KI8 946 aaKnown RBP13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Aldh1a2Q62148 518 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 ItpkcQ7TS72 678 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Slc38a7Q8BWH0 463 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Alg9Q8VDI9 611 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Mov10l1Q99MV5 1187 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Commd8Q9CZG3 183 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Sh2d3cQ9QZS8 854 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 B3galt4Q9Z0F0 371 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ism2D3Z6A3 493 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Kbtbd2G3X9X1 623 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Cbfa2t2O70374 594 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Usp10P52479 792 aaKnown RBP13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 S100a5P63084 93 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Arid5aQ3U108 590 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Nlrc4Q3UP24 1024 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Dusp16Q6PCP3 660 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Bnip1Q6QD59 228 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Moxd2Q7TT41 619 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Mcph1Q7TT79 822 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pum3Q8BKS9 647 aaKnown RBP13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Znf467Q8JZL0 594 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 DolkQ8R2Y3 534 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Prpsap2Q8R574 369 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pcdhb6Q91XZ4 772 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Txndc12Q9CQU0 170 aa13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Top3bQ9Z321 862 aaKnown RBP13.37□□□□□ -0.27
Nup88-203ENSMUST00000108531 Olfr271-ps1A0A1L1SQH2 283 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm20721E9Q2U8 318 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 C130060K24RikG3UWA8 416 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Slc10a3P21129 473 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pdss1Q33DR2 409 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Traf3Q60803 567 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Itih3Q61704 889 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Stx3Q64704 289 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tgif2lx2Q8K5B9 231 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 1700129C05RikQ9CQ77 218 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 GOLGA7BQ9D428 167 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gins2Q9D600 185 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 PirQ9D711 290 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 PllpQ9DCU2 182 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 PolhQ9JJN0 694 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ccr10Q9JL21 362 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Mpp5Q9JLB2 675 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Lrrc73B2RWC4 316 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Vmn2r84D3YWE3 849 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Olfr611K7N609 323 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Olfr612L7N462 323 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 FaahO08914 579 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Hcn2O88703 863 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Kcna3P16390 528 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Shmt1P50431 478 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Clcn3P51791 818 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Faf2Q3TDN2 445 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gdpd5Q640M6 607 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms